Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana).

Source: Description from FL-Next

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene15632 SustainPine v2.0 1070
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase small chain 1a 0.0
Complete
sp_v2.0_unigene17052 SustainPine v2.0 757
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase small chain 1a 0.0
Complete
sp_v2.0_unigene18406 SustainPine v2.0 540
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene22269 SustainPine v2.0 951
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase small chain 1a 0.0
Complete
sp_v2.0_unigene23741 SustainPine v2.0 1029
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate small subunit 0.0
Complete
sp_v2.0_unigene24288 SustainPine v2.0 1066
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate small subunit 0.0
Complete
sp_v2.0_unigene24349 SustainPine v2.0 615
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: rbs_pinth ame: full=ribulose bisphosphate carboxylase small chloroplastic short= isco small subunit flags: precursor 0.0
C-terminus
sp_v2.0_unigene24372 SustainPine v2.0 938
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase small chain 1a 0.0
Complete
sp_v2.0_unigene60282 SustainPine v2.0 1001
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate small subunit 0.0
Complete
sp_v2.0_unigene60308 SustainPine v2.0 994
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase small chain 1a 0.0
Complete
sp_v2.0_unigene60693 SustainPine v2.0 914
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: rbs_pinth ame: full=ribulose bisphosphate carboxylase small chloroplastic short= isco small subunit flags: precursor 0.0
Complete
sp_v2.0_unigene65403 SustainPine v2.0 327
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 6.0e-35
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: ribulose bisphosphate carboxylase 7.00649e-45
C-terminus
sp_v2.0_unigene76951 SustainPine v2.0 535
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene78747 SustainPine v2.0 491
• AutoFact: Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=52 Tax=Pooideae RepID=RBS2_WHEAT 9.00054e-42
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene82752 SustainPine v2.0 571
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: rbs_pinth ame: full=ribulose bisphosphate carboxylase small chloroplastic short= isco small subunit flags: precursor 0.0
Putative Complete
sp_v2.0_unigene85878 SustainPine v2.0 409
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: rbs_pinth ame: full=ribulose bisphosphate carboxylase small chloroplastic short= isco small subunit flags: precursor 0.0
Putative C-terminus
sp_v2.0_unigene91068 SustainPine v2.0 113
• AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 6.0e-06
• FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
• Blast2go: rbs_pinth ame: full=ribulose bisphosphate carboxylase small chloroplastic short= isco small subunit flags: precursor 1.65888e-08
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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain