Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3375 SustainPine v2.0 1030
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 0.0
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 0.0
C-terminus
sp_v2.0_unigene11992 SustainPine v2.0 357
AutoFact: Cyclic nucleotide-gated ion channel, putative n=1 Tax=Ricinus communis RepID=B9SF64_RICCO 1.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 4.92986e-33
Internal
sp_v2.0_unigene14165 SustainPine v2.0 455
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 2.0e-37
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 0.0
Internal
sp_v2.0_unigene26887 SustainPine v2.0 589
AutoFact: putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] dbj|BAD35887.1| putative cyclic nucleotide-regulated ion channel [Oryza sativa Japonica Group] 1.4013e-45
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 0.0
Internal
sp_v2.0_unigene29908 SustainPine v2.0 450
AutoFact: Os02g0773400 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6ZHE3_ORYSJ 2.0e-28
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.01608e-34
Internal
sp_v2.0_unigene30715 SustainPine v2.0 456
AutoFact: Unassigned protein
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
sp_v2.0_unigene39342 SustainPine v2.0 425
AutoFact: cyclic nucleotide gated channel [Arabidopsis thaliana] sp|Q9LD37.1|CNG20_ARATH RecName: Full=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; AltName: Full=Cyclic nucleotide-binding transporter 1; Flags: Precursor gb|AAF73128.1|AF148541_1 c 6.0e-22
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 6.66029e-32
Internal
sp_v2.0_unigene50429 SustainPine v2.0 398
AutoFact: Cyclic nucleotide gated channel n=1 Tax=Malus x domestica RepID=A9CRE4_MALDO 2.0e-37
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 3.36312e-44
Internal
sp_v2.0_unigene52761 SustainPine v2.0 604
AutoFact: putative cyclic nucleotide and calmodulin-regulated ion channel protein [Hordeum vulgare subsp. vulgare] 1.0e-24
FL-Next: sp=Probable cyclic nucleotide-gated ion channel 20, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable cyclic nucleotide-gated ion channel chloroplastic-like 5.10271e-30
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain