Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3854 SustainPine v2.0 1556
AutoFact: intron-binding protein aquarius [Arabidopsis thaliana] gb|AAM20715.1| unknown protein [Arabidopsis thaliana] gb|AEC09582.1| intron-binding protein aquarius [Arabidopsis thaliana] 0.0
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: intron-binding protein aquarius-like 0.0
Putative C-terminus
sp_v2.0_unigene26450 SustainPine v2.0 854
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 2.0e-36
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 2.71858e-40
C-terminus
sp_v2.0_unigene31986 SustainPine v2.0 990
AutoFact: PREDICTED: similar to zinc finger, NFX1-type containing 1 n=1 Tax=Ciona intestinalis RepID=UPI000180BF88 0.0
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nfx1-type zinc finger-containing protein 1 0.0
Internal
sp_v2.0_unigene51290 SustainPine v2.0 242
AutoFact: tRNA-splicing endonuclease positive effector-related protein [Arabidopsis thaliana] emb|CAB43845.1| putative protein [Arabidopsis thaliana] emb|CAB81003.1| putative protein [Arabidopsis thaliana] gb|AEE85721.1| tRNA-splicing endonuclease positive effector 1.0e-29
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-splicing endonuclease positive effector-related protein 3.92829e-38
Internal
sp_v2.0_unigene58092 SustainPine v2.0 407
AutoFact: DNA helicase domain-containing protein [Arabidopsis thaliana] gb|AEE34425.1| DNA helicase domain-containing protein [Arabidopsis thaliana] 2.0e-26
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase domain-containing protein 3.02526e-31
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain