Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2422 SustainPine v2.0 3567
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Complete
sp_v2.0_unigene6451 SustainPine v2.0 3323
AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
C-terminus
sp_v2.0_unigene19083 SustainPine v2.0 1105
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 0.0
Putative N-terminus
sp_v2.0_unigene27236 SustainPine v2.0 3650
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 2 0.0
Complete
sp_v2.0_unigene27355 SustainPine v2.0 1715
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
N-terminus
sp_v2.0_unigene29131 SustainPine v2.0 535
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 1.0e-29
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response 5.22147e-34
Putative N-terminus
sp_v2.0_unigene29443 SustainPine v2.0 803
AutoFact: auxin response factor 1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: arf4 protein 0.0
Internal
sp_v2.0_unigene46047 SustainPine v2.0 525
AutoFact: Predicted protein (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SBM0_PHYPA 2.0e-37
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: rav-like b3 domain dna binding protein 0.0
Internal
sp_v2.0_unigene50235 SustainPine v2.0 397
AutoFact: auxin response factor 10 [Oryza sativa] 3.0e-11
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 18-like 5.14479e-13
Putative N-terminus
sp_v2.0_unigene58663 SustainPine v2.0 307
AutoFact: Auxin response factor, putative n=1 Tax=Ricinus communis RepID=B9RR61_RICCO 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: protein 0.0
Internal
sp_v2.0_unigene64932 SustainPine v2.0 564
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus
sp_v2.0_unigene74897 SustainPine v2.0 379
AutoFact: Auxin response factor 1 n=2 Tax=Gossypium RepID=Q3Y6G6_GOSBA 8.0e-14
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 1 9.05878e-16
N-terminus
sp_v2.0_unigene86118 SustainPine v2.0 445
AutoFact: Putative auxin response factor 2 n=1 Tax=Amborella trichopoda RepID=E0WD83_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor-like protein 0.0
Internal
sp_v2.0_unigene91517 SustainPine v2.0 404
AutoFact: Auxin response factor 23 n=6 Tax=Oryza sativa RepID=ARFW_ORYSJ 7.0e-15
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor expressed 5.10432e-17
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain