Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene30814 SustainPine v2.0 328
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 2.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.97976e-26
Internal
sp_v2.0_unigene36654 SustainPine v2.0 565
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.21192e-08
Putative C-terminus
sp_v2.0_unigene38889 SustainPine v2.0 572
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 8.0e-05
unknown
sp_v2.0_unigene43991 SustainPine v2.0 268
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty1-copia subclass 4.68405e-14
Internal
sp_v2.0_unigene48153 SustainPine v2.0 490
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 7.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 5.833e-27
Internal
sp_v2.0_unigene73419 SustainPine v2.0 189
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 2.62809e-09
Internal
sp_v2.0_unigene83737 SustainPine v2.0 368
• AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 3.28507e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain