Name:
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Term:
GO:0000184
Source:
GO from Blast2go
Ontology:
Biological Process
UniGenes with this annotation:
|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uma_v2.0_unigene4718
|
uma v2.0
|
1126
|
|
• AutoFact: EST1 domain containing protein
|
8.0e-24
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: telomerase activating protein est1
|
0.0
|
|
N-terminus
|
|
uma_v2.0_unigene12847
|
uma v2.0
|
1371
|
|
• AutoFact: HIV Tat-specific factor 1 [Arabidopsis thaliana] emb|CAC01867.1| putative protein [Arabidopsis thaliana] gb|AAY25436.1| At5g16260 [Arabidopsis thaliana] dbj|BAF01062.1| hypothetical protein [Arabidopsis thaliana] gb|AED92266.1| HIV Tat-specific factor 1 [
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hiv tat-specific factor 1 homolog
|
0.0
|
|
N-terminus
|
|
uma_v2.0_unigene14327
|
uma v2.0
|
1205
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: telomerase activating protein est1
|
0.0
|
|
Internal
|
|
uma_v2.0_unigene23178
|
uma v2.0
|
528
|
|
• AutoFact: Nonsense-mediated decay UPF3 [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein Sb06g017380; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: smg-4 upf3-like protein
|
0.0
|
|
N-terminus
|
|
uma_v2.0_unigene35240
|
uma v2.0
|
599
|
|
• AutoFact: putative cytokinin inducibl protein [Oryza sativa Japonica Group] gb|AAQ56472.1| putative cytokinin inducible protein [Oryza sativa Japonica Group]
|
1.0e-23
|
|
• FL-Next: tr=Cig3; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: telomerase activating protein est1
|
2.98929e-28
|
|
Internal
|
|
uma_v2.0_unigene35584
|
uma v2.0
|
324
|
|
• AutoFact: EST1 domain containing protein
|
8.0e-08
|
|
• FL-Next: tr=Cig3; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: telomerase activating protein est1
|
1.77065e-23
|
|
Internal
|
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