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Assembly Name: uma v2.0

Name: regulation of seed germination

Term: GO:0010029  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene6 uma v2.0 527
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene1507 uma v2.0 943
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Putative Complete
uma_v2.0_unigene2523 uma v2.0 392
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
Blast2go: outward rectifying potassium channel 0.0
unknown
uma_v2.0_unigene5483 uma v2.0 675
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
Blast2go: histidine kinase 0.0
unknown
uma_v2.0_unigene6072 uma v2.0 817
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: brca1-associated protein 0.0
C-terminus
uma_v2.0_unigene6502 uma v2.0 647
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAF02878.1|AC009525_12 Unknown protein [Arabidopsis thaliana] gb|AAM62805.1| thiamin pyrophosphokinase, putative [Arabidopsis thaliana] gb|AEE27489.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 0.0
Putative C-terminus
uma_v2.0_unigene7360 uma v2.0 1069
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene7493 uma v2.0 334
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
Blast2go: histidine kinase 0.0
Internal
uma_v2.0_unigene10741 uma v2.0 363
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
FL-Next: sp=Calcium-activated outward-rectifying potassium channel 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: outward rectifying potassium channel 0.0
Internal
uma_v2.0_unigene13594 uma v2.0 1205
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
C-terminus
uma_v2.0_unigene20135 uma v2.0 640
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: brca1-associated protein 0.0
Internal
uma_v2.0_unigene20822 uma v2.0 398
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
Blast2go: histidine kinase 0.0
Internal
uma_v2.0_unigene20839 uma v2.0 566
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
uma_v2.0_unigene21061 uma v2.0 307
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Internal
uma_v2.0_unigene21239 uma v2.0 239
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
Putative C-terminus
uma_v2.0_unigene21563 uma v2.0 449
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 8.60706e-23
Internal
uma_v2.0_unigene22377 uma v2.0 360
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histidine kinase 0.0
Putative C-terminus
uma_v2.0_unigene23113 uma v2.0 256
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: outward rectifying potassium channel 0.0
C-terminus
uma_v2.0_unigene23370 uma v2.0 401
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: Isoform 2 of Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 0.0
Blast2go: histidine kinase 0.0
Internal
uma_v2.0_unigene23812 uma v2.0 395
AutoFact: Thiamin pyrophosphokinase, putative n=1 Tax=Ricinus communis RepID=B9SAN6_RICCO 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase 7.48446e-21
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain