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Assembly Name: uma v2.0

Name: chromatin

Term: GO:0000785  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uma_v2.0_unigene2685 uma v2.0 380
AutoFact: FCA gamma [Brassica napus] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein 1.37341e-12
Internal
uma_v2.0_unigene3223 uma v2.0 1000
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uma_v2.0_unigene4633 uma v2.0 1121
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Putative N-terminus
uma_v2.0_unigene8931 uma v2.0 478
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown
uma_v2.0_unigene10333 uma v2.0 771
AutoFact: Histone acetyltransferase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJM4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uma_v2.0_unigene10512 uma v2.0 658
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uma_v2.0_unigene14120 uma v2.0 807
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Putative N-terminus
uma_v2.0_unigene15546 uma v2.0 1768
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-binding domain protein 0.0
Complete
uma_v2.0_unigene15664 uma v2.0 1675
AutoFact: pfam00385, Chromo, Chromodomain 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: terminal flower 2 protein 0.0
Complete
uma_v2.0_unigene17080 uma v2.0 408
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
FL-Next: Isoform Alpha of Flowering time control protein FCA OS=Arabidopsis thaliana GN=FCA 0.0
Blast2go: flowering time control protein 2.21199e-12
Internal
uma_v2.0_unigene22231 uma v2.0 493
AutoFact: Histone acetyltransferase n=5 Tax=rosids RepID=B9H794_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
N-terminus
uma_v2.0_unigene24651 uma v2.0 556
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Complete
uma_v2.0_unigene26479 uma v2.0 405
AutoFact: human Mi-2 autoantigen-like protein [Arabidopsis thaliana] dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana] 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 3.53322e-32
Internal
uma_v2.0_unigene27431 uma v2.0 374
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uma_v2.0_unigene27508 uma v2.0 300
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
Coding
uma_v2.0_unigene28157 uma v2.0 194
AutoFact: Major facilitator protein n=3 Tax=Arabidopsis RepID=Q8H132_ARATH 0.0
Blast2go: major facilitator protein 0.0
unknown
uma_v2.0_unigene29670 uma v2.0 150
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g19525; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uma_v2.0_unigene34649 uma v2.0 324
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AAF79432.1|AC025808_14 F18O14.27 [Arabidopsis thaliana] gb|AEE29863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
unknown
uma_v2.0_unigene34800 uma v2.0 148
AutoFact: Flowering time control protein-like protein (Fragment) n=1 Tax=Picea sitchensis RepID=E0ZL31_PICSI 7.0e-11
Blast2go: flowering time control protein 2.21199e-12
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain