Sustainpine_db
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Assembly Name: inia v1.0

Name: Regulator of chromosome condensation, RCC1

Term: IPR000408  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene11 inia v1.0 1607
AutoFact: 4-coumarate--CoA ligase-like 1 [Arabidopsis thaliana] sp|Q9LQ12.1|4CLL1_ARATH RecName: Full=4-coumarate--CoA ligase-like 1; AltName: Full=4-coumarate--CoA ligase isoform 10; Short=At4CL10 gb|AAF75805.1|AC011000_8 Strong similarity to 4-coumarate:CoA ligas 0.0
FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
Blast2go: acyl:coa ligase 0.0
C-terminus
inia_v1.0_unigene52 inia v1.0 1954
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9R8J7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl:coa ligase 0.0
Complete
inia_v1.0_unigene391 inia v1.0 1455
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding protein 1a 0.0
C-terminus
inia_v1.0_unigene414 inia v1.0 830
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
C-terminus
inia_v1.0_unigene452 inia v1.0 701
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
C-terminus
inia_v1.0_unigene525 inia v1.0 1676
AutoFact: AMP dependent CoA ligase, putative n=1 Tax=Ricinus communis RepID=B9S209_RICCO 0.0
FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
inia_v1.0_unigene1002 inia v1.0 1568
AutoFact: Kinesin, motor region [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
Putative Complete
inia_v1.0_unigene1043 inia v1.0 1225
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 3 [Arabidopsis thaliana] gb|AAK32926.1|AF367339_1 At2g11520/F14P14.15 [Arabidopsis thaliana] gb|AAD28055.2| putative protein kinase [Arabidopsis thaliana] gb|AAM16251.1| At2g11520/F14P14.15 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
inia_v1.0_unigene1097 inia v1.0 1090
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongator protein 2 0.0
Putative Complete
inia_v1.0_unigene1347 inia v1.0 977
AutoFact: Expansin n=1 Tax=Vicia faba RepID=A2IBX3_VICFA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expansin 0.0
C-terminus
inia_v1.0_unigene1401 inia v1.0 1826
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Complete
inia_v1.0_unigene1503 inia v1.0 973
AutoFact: putative LRR receptor-like serine/threonine-protein kinase RKF3 [Arabidopsis thaliana] sp|P93050.1|RKF3_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase RKF3; AltName: Full=Receptor-like kinase in flowers 3; Flags: Precursor 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase rkf3-like 0.0
C-terminus
inia_v1.0_unigene1591 inia v1.0 909
AutoFact: Peptide transporter, putative n=1 Tax=Ricinus communis RepID=B9T6M4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1594 inia v1.0 1309
AutoFact: putative protein phosphatase 2C 63 [Arabidopsis thaliana] sp|O81760.1|P2C63_ARATH RecName: Full=Probable protein phosphatase 2C 63; Short=AtPP2C63 gb|AAK50092.1|AF372953_1 AT4g33920/F17I5_110 [Arabidopsis thaliana] emb|CAA19874.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 63-like 0.0
C-terminus
inia_v1.0_unigene1718 inia v1.0 1083
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1787 inia v1.0 1015
AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Blast2go: 4-coumarate: ligase 0.0
C-terminus
inia_v1.0_unigene1989 inia v1.0 1251
AutoFact: wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj|BAG94677.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
inia_v1.0_unigene2211 inia v1.0 882
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
inia_v1.0_unigene2304 inia v1.0 833
AutoFact: Expansin n=6 Tax=Pinaceae RepID=Q9SWY1_PINTA 0.0
FL-Next: tr=Expansin; Pinus taeda (Loblolly pine). 0.0
Blast2go: expansin 0.0
C-terminus
inia_v1.0_unigene2457 inia v1.0 1812
AutoFact: UDP-glycosyltransferase-like protein [Arabidopsis thaliana] sp|Q9SJL0.1|U86A1_ARATH RecName: Full=UDP-glycosyltransferase 86A1 gb|AAD31582.1| putative glucosyltransferase [Arabidopsis thaliana] gb|AAL06924.1| At2g36970/T1J8.15 [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: udp-glycosyltransferase-like protein 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain