Sustainpine_db
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Assembly Name: inia v1.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene95 inia v1.0 911
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80-like 0.0
C-terminus
inia_v1.0_unigene109 inia v1.0 907
AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
inia_v1.0_unigene210 inia v1.0 1354
AutoFact: DUF716 domain containing protein 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Complete
inia_v1.0_unigene377 inia v1.0 1152
AutoFact: WS0374.C21_B21 SS-B-N-22 Picea sitchensis cDNA clone WS0374_B21 3', mRNA sequence. 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene583 inia v1.0 949
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like 0.0
FL-Next: sp=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like 0.0
C-terminus
inia_v1.0_unigene963 inia v1.0 267
AutoFact: nitric oxide synthase-interacting protein [Arabidopsis thaliana] gb|AAD25548.1|AC005850_5 Unknown protein [Arabidopsis thaliana] gb|AAM62779.1| unknown [Arabidopsis thaliana] gb|AAY57588.1| RING finger family protein [Arabidopsis thaliana] gb|ABG48469.1| 0.0
Blast2go: nitric oxide synthase-interacting protein 0.0
unknown
inia_v1.0_unigene1072 inia v1.0 1059
AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO 0.0
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g13530-like protein 0.0
C-terminus
inia_v1.0_unigene1092 inia v1.0 1111
AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] dbj|BAE98370.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30249.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c3hc4-type ring finger protein 0.0
Complete
inia_v1.0_unigene1183 inia v1.0 910
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
C-terminus
inia_v1.0_unigene1337 inia v1.0 1940
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc c3hc4 type family protein 2.6244e-35
Putative Complete
inia_v1.0_unigene1530 inia v1.0 1877
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc c3hc4 type family protein 0.0
Complete
inia_v1.0_unigene1684 inia v1.0 1158
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851156.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974908.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAN13007.1| unknown protein [Arabidops 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
inia_v1.0_unigene1786 inia v1.0 958
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
inia_v1.0_unigene2167 inia v1.0 1657
AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj| 0.0
FL-Next: sp=E3 ubiquitin-protein ligase PRT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase prt1 0.0
C-terminus
inia_v1.0_unigene2274 inia v1.0 1019
AutoFact: putative receptor-like protein kinase [Arabidopsis thaliana] 4.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase fei 0.0
C-terminus
inia_v1.0_unigene2290 inia v1.0 968
AutoFact: pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
Complete
inia_v1.0_unigene2343 inia v1.0 772
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
N-terminus
inia_v1.0_unigene2470 inia v1.0 705
AutoFact: FERONIA receptor-like kinase [Cardamine flexuosa] 0.0
Blast2go: feronia receptor-like kinase 0.0
unknown
inia_v1.0_unigene2646 inia v1.0 762
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Coding
inia_v1.0_unigene2743 inia v1.0 692
AutoFact: Abscisic acid receptor PYR1 n=1 Tax=Fragaria x ananassa RepID=F2YHU9_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyr1 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain