Sustainpine_db
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Assembly Name: inia v1.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
inia_v1.0_unigene1269 inia v1.0 1640
AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosyl-trna synthetase 0.0
Complete
inia_v1.0_unigene1275 inia v1.0 1455
AutoFact: prolactin regulatory element-binding protein [Arabidopsis thaliana] sp|Q39221.4|STLP2_ARATH RecName: Full=SEC12-like protein 2 gb|AAC67323.1| putative protein transport protein SEC12p [Arabidopsis thaliana] gb|AAL67028.1| putative protein transport protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
inia_v1.0_unigene1288 inia v1.0 1821
AutoFact: transducin-like protein [Arabidopsis thaliana] gb|AAK43883.1|AF370506_1 putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAD10153.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91214.1| putative WD-40 repeat protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-rich wd repeat-containing protein 1 0.0
Complete
inia_v1.0_unigene1330 inia v1.0 1214
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
C-terminus
inia_v1.0_unigene1360 inia v1.0 1192
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin beta-like protein 3-like 0.0
C-terminus
inia_v1.0_unigene1461 inia v1.0 937
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRX4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1467 inia v1.0 869
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] 1.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transducin wd40 domain-containing protein 1.34525e-43
C-terminus
inia_v1.0_unigene1525 inia v1.0 1079
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Putative Complete
inia_v1.0_unigene1546 inia v1.0 1085
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
inia_v1.0_unigene1558 inia v1.0 1585
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|ACI46510.1| At5g11240 [Arabidopsis thaliana] gb|AED91651.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
Putative C-terminus
inia_v1.0_unigene1725 inia v1.0 1223
AutoFact: Phosphorylase-like protein protein [Arabidopsis thaliana] gb|AEE85565.1| Phosphorylase-like protein protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bark storage protein a-like 0.0
Complete
inia_v1.0_unigene1780 inia v1.0 1060
AutoFact: WD-repeat protein [Arabidopsis arenosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1786 inia v1.0 958
AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
inia_v1.0_unigene1824 inia v1.0 1286
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
inia_v1.0_unigene1935 inia v1.0 859
AutoFact: cell division cycle 20, cofactor of APC complex [Arabidopsis thaliana] emb|CAB38785.1| WD-repeat protein-like protein [Arabidopsis thaliana] emb|CAB80044.1| WD-repeat protein-like protein [Arabidopsis thaliana] gb|ABG48494.1| At4g33270 [Arabidopsis thalia 0.0
Blast2go: cell division cycle cofactor of apc complex 0.0
Putative coding
inia_v1.0_unigene1999 inia v1.0 1162
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
Internal
inia_v1.0_unigene2008 inia v1.0 1034
AutoFact: SEC12-like protein 1 [Arabidopsis thaliana] sp|Q8GYE0.2|PHF1_ARATH RecName: Full=SEC12-like protein 1; AltName: Full=Protein PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR 1; Short=PHF-1 emb|CAB41339.1| putative protein [Arabidopsis thaliana] gb|ABI49462.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1-like 0.0
C-terminus
inia_v1.0_unigene2265 inia v1.0 1092
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB87620.1| putative protein [Arabidopsis thaliana] gb|AAM64344.1| unknown [Arabidopsis thaliana] gb|ABF85783.1| At5g14530 [Arabidopsis thaliana] gb|AED92044.1| transducin/WD40 domain-co 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: set1 complex component swd2 0.0
C-terminus
inia_v1.0_unigene2312 inia v1.0 1933
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001078546.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana] gb|AAK96726.1| WD-repeat protein-like [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 26-like 0.0
C-terminus
inia_v1.0_unigene2341 inia v1.0 908
AutoFact: WD-40 repeat family protein 3.0e-11
Blast2go: protein 7.30081e-13
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain