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Assembly Name: uagpf v2.0

Name: Methyl-CpG DNA binding

Term: IPR001739  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene219 uagpf v2.0 327
AutoFact: CDC6 protein (ISS) [Ostreococcus tauri] emb|CAL51521.1| CDC6 protein (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene4077 uagpf v2.0 719
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
uagpf_v2_unigene6253 uagpf v2.0 580
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-cpg-binding domain 10 3.65069e-35
N-terminus
uagpf_v2_unigene9664 uagpf v2.0 791
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 6.0e-30
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 1.41321e-41
N-terminus
uagpf_v2_unigene11316 uagpf v2.0 660
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 8.65302e-42
C-terminus
uagpf_v2_unigene11533 uagpf v2.0 637
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: Isoform 2 of Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 0.0
Blast2go: nuclear protein x1 0.0
Internal
uagpf_v2_unigene26490 uagpf v2.0 421
AutoFact: CDC6 protein (ISS) [Ostreococcus tauri] emb|CAL51521.1| CDC6 protein (ISS) [Ostreococcus tauri] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene30023 uagpf v2.0 568
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
uagpf_v2_unigene33062 uagpf v2.0 198
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
Internal
uagpf_v2_unigene40938 uagpf v2.0 520
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 0.0
unknown
uagpf_v2_unigene41596 uagpf v2.0 272
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear protein x1 0.0
Putative N-terminus
uagpf_v2_unigene43436 uagpf v2.0 243
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
Blast2go: nuclear protein x1 0.0
Putative coding
uagpf_v2_unigene49479 uagpf v2.0 155
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
Blast2go: nuclear protein x1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain