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Assembly Name: uagpf v2.0

Name: Nucleic acid binding NABP

Term: IPR012940  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2148 uagpf v2.0 767
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 1.0e-10
Blast2go: pumilio homolog 2-like 4.159e-14
Putative coding
uagpf_v2_unigene2847 uagpf v2.0 597
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: sp=Pumilio homolog 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pumilio homolog 2-like 0.0
Internal
uagpf_v2_unigene5459 uagpf v2.0 745
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene9509 uagpf v2.0 492
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene14595 uagpf v2.0 735
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene17662 uagpf v2.0 652
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
Blast2go: pumilio homolog 1-like 0.0
unknown
uagpf_v2_unigene18381 uagpf v2.0 557
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
Blast2go: pumilio homolog 2-like 0.0
unknown
uagpf_v2_unigene19629 uagpf v2.0 724
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
uagpf_v2_unigene19722 uagpf v2.0 269
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
Blast2go: pumilio homolog 2-like 0.0
unknown
uagpf_v2_unigene25841 uagpf v2.0 368
AutoFact: Unassigned protein
FL-Next: sp=Pumilio homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pumilio homolog 2-like 1.12651e-35
N-terminus
uagpf_v2_unigene33949 uagpf v2.0 325
AutoFact: Unassigned protein
Blast2go: pumilio homolog 2-like 1.12651e-35
unknown
uagpf_v2_unigene36993 uagpf v2.0 386
AutoFact: pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] 2.0e-38
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38570 uagpf v2.0 409
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=PUF-domain RNA-binding protein; Physcomitrella patens. 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39392 uagpf v2.0 402
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene40747 uagpf v2.0 442
AutoFact: pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] 2.0e-38
Blast2go: protein 0.0
unknown
uagpf_v2_unigene45418 uagpf v2.0 281
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb04g037410; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pumilio homolog 2-like 0.0
Internal
uagpf_v2_unigene48216 uagpf v2.0 268
AutoFact: Os01g0844800 protein n=3 Tax=Oryza sativa RepID=Q0JHT2_ORYSJ 0.0
Blast2go: pumilio homolog 2-like 0.0
unknown
uagpf_v2_unigene49562 uagpf v2.0 293
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
Blast2go: pumilio homolog 2-like 0.0
Putative coding
uagpf_v2_unigene50759 uagpf v2.0 416
AutoFact: pumilio domain-containing protein PPD1 [Populus tremula x Populus tremuloides] 2.0e-38
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54870 uagpf v2.0 281
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain