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Assembly Name: uagpf v2.0

Name: Replication factor-A protein 1, N-terminal

Term: IPR007199  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene283 uagpf v2.0 488
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
Putative coding
uagpf_v2_unigene2923 uagpf v2.0 676
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: replication factor a1 0.0
Putative C-terminus
uagpf_v2_unigene3926 uagpf v2.0 1358
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9RK18_RICCO 0.0
FL-Next: tr=RPA 70kDa subunit; Pisum sativum (Garden pea). 0.0
Blast2go: replication factor a1 0.0
Putative C-terminus
uagpf_v2_unigene8446 uagpf v2.0 633
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: replication factor a1 0.0
C-terminus
uagpf_v2_unigene11666 uagpf v2.0 727
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
N-terminus
uagpf_v2_unigene11671 uagpf v2.0 348
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Putative Complete
uagpf_v2_unigene30009 uagpf v2.0 591
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 2.11561e-32
N-terminus
uagpf_v2_unigene31459 uagpf v2.0 550
AutoFact: DUF936 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene35248 uagpf v2.0 387
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor a1 0.0
Internal
uagpf_v2_unigene36230 uagpf v2.0 501
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
unknown
uagpf_v2_unigene40890 uagpf v2.0 294
AutoFact: replication protein A1 [Oryza sativa Indica Group] gb|EAY89034.1| hypothetical protein OsI_10518 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 0.0
Internal
uagpf_v2_unigene41131 uagpf v2.0 302
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
Blast2go: replication factor a1 0.0
unknown
uagpf_v2_unigene47058 uagpf v2.0 487
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication factor a1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain