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Assembly Name: uagpf v2.0

Name: Histone deacetylase interacting

Term: IPR013194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5264 uagpf v2.0 437
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene6145 uagpf v2.0 1084
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sin3 histone deacetylase complex 3.22299e-44
Putative Complete
uagpf_v2_unigene6800 uagpf v2.0 572
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene17897 uagpf v2.0 948
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 0.0
Putative Complete
uagpf_v2_unigene19043 uagpf v2.0 330
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-09
FL-Next: sp=Paired amphipathic helix protein Sin3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase sin3 component 3.71016e-11
Putative N-terminus
uagpf_v2_unigene19297 uagpf v2.0 640
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 4.90987e-39
Putative Complete
uagpf_v2_unigene28059 uagpf v2.0 364
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene28278 uagpf v2.0 419
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
uagpf_v2_unigene29093 uagpf v2.0 440
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
Blast2go: sin3 histone deacetylase complex 0.0
unknown
uagpf_v2_unigene34392 uagpf v2.0 330
AutoFact: paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] sp|Q9LFQ3.2|SNL2_ARATH RecName: Full=Paired amphipathic helix protein Sin3-like 2 gb|AED92105.1| paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] 2.0e-14
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 6.56335e-22
N-terminus
uagpf_v2_unigene35338 uagpf v2.0 242
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene37869 uagpf v2.0 437
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene39369 uagpf v2.0 276
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene40775 uagpf v2.0 484
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: tr=WRKY domain class transcription factor; Malus domestica (Apple) (Pyrus malus). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene48884 uagpf v2.0 404
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HLV3_POPTR 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene52617 uagpf v2.0 657
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 3.0e-36
FL-Next: sp=Paired amphipathic helix protein Sin3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene54511 uagpf v2.0 383
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 9.99995e-41
FL-Next: sp=Paired amphipathic helix protein Sin3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 3.22299e-44
Putative N-terminus
uagpf_v2_unigene54905 uagpf v2.0 371
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 8.0e-11
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: sin3 histone deacetylase complex 3.90018e-12
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain