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Assembly Name: uagpf v2.0

Name: ARID/BRIGHT DNA-binding domain

Term: IPR001606  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37906 uagpf v2.0 382
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
Blast2go: high mobility group family 0.0
Coding
uagpf_v2_unigene39941 uagpf v2.0 364
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
Blast2go: protein 7.00649e-45
unknown
uagpf_v2_unigene40188 uagpf v2.0 471
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
Internal
uagpf_v2_unigene42955 uagpf v2.0 361
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 7.00649e-45
Internal
uagpf_v2_unigene43772 uagpf v2.0 202
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 8.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group b protein 15-like 0.0
Internal
uagpf_v2_unigene46824 uagpf v2.0 369
AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 7.00649e-44
FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
Blast2go: lysine-specific demethylase 5d 0.0
Putative N-terminus
uagpf_v2_unigene50481 uagpf v2.0 308
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
uagpf_v2_unigene50727 uagpf v2.0 353
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.24593e-29
N-terminus
uagpf_v2_unigene51188 uagpf v2.0 668
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
Blast2go: dna binding 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain