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Assembly Name: uagpf v2.0

Name: Uncharacterised protein family UPF0016

Term: IPR001727  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1718 uagpf v2.0 355
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene5301 uagpf v2.0 697
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
N-terminus
uagpf_v2_unigene5385 uagpf v2.0 683
AutoFact: Transmembrane protein TPARL, putative n=1 Tax=Ricinus communis RepID=B9RWP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene5919 uagpf v2.0 449
AutoFact: [S] COG2119 Predicted membrane protein 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene11782 uagpf v2.0 449
AutoFact: Nop14 multi-domain protein 7.0e-05
Blast2go: pre-rrna-processing protein esf1-like 0.0
Coding
uagpf_v2_unigene15366 uagpf v2.0 1045
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene17621 uagpf v2.0 740
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
C-terminus
uagpf_v2_unigene18007 uagpf v2.0 709
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
uagpf_v2_unigene32478 uagpf v2.0 291
AutoFact: transmembrane protein, putative [Arabidopsis thaliana] 3.0e-26
unknown
uagpf_v2_unigene34217 uagpf v2.0 294
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
N-terminus
uagpf_v2_unigene36963 uagpf v2.0 419
AutoFact: UPF0016 protein 3 [Arabidopsis thaliana] ref|NP_851098.1| UPF0016 protein 3 [Arabidopsis thaliana] sp|Q93Y38.1|GDT13_ARATH RecName: Full=GDT1-like protein 3; Flags: Precursor gb|AAK96668.1| transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: membrane protein 0.0
Internal
uagpf_v2_unigene43630 uagpf v2.0 276
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.28463e-27
Internal
uagpf_v2_unigene49159 uagpf v2.0 317
AutoFact: [S] COG2119 Predicted membrane protein 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 4.88757e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain