Sustainpine_db
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Assembly Name: uagpf v2.0

Name: YqgF/RNase H-like domain

Term: IPR006641  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene320 uagpf v2.0 450
AutoFact: growth-regulating factor 1 [Arabidopsis thaliana] gb|AAC32431.1| unknown protein [Arabidopsis thaliana] gb|AAM52876.1| transcription activator [Arabidopsis thaliana] dbj|BAH30398.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07363.1| growth-regulat 2.8026e-45
Blast2go: transcription activator 0.0
Putative coding
uagpf_v2_unigene7605 uagpf v2.0 721
AutoFact: [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8876 uagpf v2.0 367
AutoFact: putative growth-regulating factor 6 [Zea mays] gb|ABQ01219.1| putative growth-regulating factor 6 [Zea mays] 1.4013e-45
Blast2go: growth-regulating factor 6 0.0
Coding
uagpf_v2_unigene9806 uagpf v2.0 334
AutoFact: Transcription elongation factor SPT6 (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RRH2_PHYPA 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: transcription elongation factor spt6 2.51244e-37
Internal
uagpf_v2_unigene11498 uagpf v2.0 394
AutoFact: transcription elongation factor SPT6 [Arabidopsis thaliana] gb|AEE34374.1| transcription elongation factor SPT6 [Arabidopsis thaliana] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription elongation factor spt6 1.43192e-34
Internal
uagpf_v2_unigene26316 uagpf v2.0 358
AutoFact: putative growth-regulating factor 6 [Zea mays] gb|ABQ01219.1| putative growth-regulating factor 6 [Zea mays] 1.4013e-45
Blast2go: growth-regulating factor 6 0.0
unknown
uagpf_v2_unigene26325 uagpf v2.0 329
AutoFact: putative holliday junction resolvase [Arabidopsis thaliana] gb|AEE28856.1| putative holliday junction resolvase [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: holliday junction resolvase 9.72988e-25
C-terminus
uagpf_v2_unigene39244 uagpf v2.0 365
AutoFact: [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene44368 uagpf v2.0 380
AutoFact: GRF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIZ8_MALDO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: growth-regulating factor 1 0.0
Internal
uagpf_v2_unigene48449 uagpf v2.0 239
AutoFact: Herpes_gp2 multi-domain protein 1.0e-05
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain