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Assembly Name: uagpf v2.0

Name: Squalene/phytoene synthase

Term: IPR002060  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene2942 uagpf v2.0 591
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squalene synthase 2 0.0
C-terminus
uagpf_v2_unigene3986 uagpf v2.0 463
• AutoFact: [I] COG1562 Phytoene/squalene synthetase 4.0e-20
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: upf0551 protein c8orf38 mitochondrial-like 0.0
C-terminus
uagpf_v2_unigene8391 uagpf v2.0 555
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• Blast2go: squalene synthase 2 0.0
Putative coding
uagpf_v2_unigene9607 uagpf v2.0 396
• AutoFact: [I] COG1562 Phytoene/squalene synthetase 4.0e-20
• FL-Next: tr=Os06g0104100 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: upf0551 protein c8orf38 mitochondrial-like 0.0
Internal
uagpf_v2_unigene16687 uagpf v2.0 861
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squalene synthase 2 0.0
N-terminus
uagpf_v2_unigene26056 uagpf v2.0 324
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squalene synthase 2 0.0
Internal
uagpf_v2_unigene33839 uagpf v2.0 387
• AutoFact: Phytoene synthase n=1 Tax=Salicornia europaea RepID=A1KYX8_SALEU 0.0
• Blast2go: phytoene synthase 0.0
unknown
uagpf_v2_unigene49737 uagpf v2.0 417
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• Blast2go: squalene synthase 2 0.0
unknown
uagpf_v2_unigene52285 uagpf v2.0 313
• AutoFact: Squalene synthase n=1 Tax=Taxus cuspidata RepID=A9NJG0_TAXCU 0.0
• Blast2go: squalene synthase 2 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain