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Assembly Name: uagpf v2.0

Name: Leucine-rich repeat, cysteine-containing subtype

Term: IPR006553  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10273 uagpf v2.0 562
AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
uagpf_v2_unigene10935 uagpf v2.0 471
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
uagpf_v2_unigene12025 uagpf v2.0 1082
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene13746 uagpf v2.0 1939
AutoFact: F-box/LRR-repeat protein 5 [Arabidopsis thaliana] ref|NP_001185415.1| F-box/LRR-repeat protein 5 [Arabidopsis thaliana] sp|O49286.1|SKP2B_ARATH RecName: Full=F-box protein SKP2B; AltName: Full=F-box/LRR-repeat protein 5; Short=AtFB5; AltName: Full=SKP2-li 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein fbl2 0.0
Complete
uagpf_v2_unigene13814 uagpf v2.0 597
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
N-terminus
uagpf_v2_unigene14056 uagpf v2.0 546
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 3-like 0.0
C-terminus
uagpf_v2_unigene14619 uagpf v2.0 743
AutoFact: Unassigned protein
FL-Next: Isoform 2 of F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 0.0
Blast2go: f-box lrr-repeat protein 14 0.0
C-terminus
uagpf_v2_unigene15755 uagpf v2.0 448
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene16074 uagpf v2.0 317
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At4g08330, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene16085 uagpf v2.0 877
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein skip1 0.0
C-terminus
uagpf_v2_unigene17573 uagpf v2.0 656
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
uagpf_v2_unigene18109 uagpf v2.0 709
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 3-like 0.0
C-terminus
uagpf_v2_unigene18286 uagpf v2.0 486
AutoFact: uncharacterized protein [Arabidopsis thaliana] sp|Q9STN5.1|Y4833_ARATH RecName: Full=Uncharacterized protein At4g08330, chloroplastic; Flags: Precursor emb|CAB52555.1| putative protein [Arabidopsis thaliana] emb|CAB77958.1| putative protein [Arabidopsis t 3.0e-26
Blast2go: uncharacterized protein chloroplastic-like 1.75428e-36
unknown
uagpf_v2_unigene18508 uagpf v2.0 746
AutoFact: EIN3-binding F-box protein 1 n=1 Tax=Solanum lycopersicum RepID=Q2PQJ0_SOLLC 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
uagpf_v2_unigene18574 uagpf v2.0 675
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene19105 uagpf v2.0 1045
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
Blast2go: f-box family protein 0.0
Coding
uagpf_v2_unigene25218 uagpf v2.0 321
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene25929 uagpf v2.0 426
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
unknown
uagpf_v2_unigene26655 uagpf v2.0 552
AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 4-like 0.0
Internal
uagpf_v2_unigene27632 uagpf v2.0 560
AutoFact: F-box/LRR-repeat protein 4 [Arabidopsis thaliana] sp|Q9C5D2.1|FBL4_ARATH RecName: Full=F-box/LRR-repeat protein 4; Short=AtFBL4 gb|AAK26038.1|AF360328_1 putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gb|AAK32821.1|AF361808_1 AT4g15470/dl3775 0.0
FL-Next: sp=F-box/LRR-repeat protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box lrr-repeat protein 4-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain