Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ribosomal protein L40e

Term: IPR001975  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene473 uagpf v2.0 703
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene6150 uagpf v2.0 646
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin fusion protein 0.0
C-terminus
uagpf_v2_unigene7229 uagpf v2.0 436
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: hexaubiquitin protein 0.0
Putative Complete
uagpf_v2_unigene13201 uagpf v2.0 479
• AutoFact: Ubiquitin [Medicago truncatula] 0.0
• Blast2go: polyubiquitin 10 0.0
unknown
uagpf_v2_unigene13517 uagpf v2.0 461
• AutoFact: ubiquitin [Aspergillus clavatus NRRL 1] gb|EAW09700.1| ubiquitin [Aspergillus clavatus NRRL 1] 9.0e-31
• FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
• Blast2go: ubiquitin 6.56803e-34
N-terminus
uagpf_v2_unigene14154 uagpf v2.0 390
• AutoFact: polyubiquitin [Pinus sylvestris] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene15500 uagpf v2.0 1209
• AutoFact: 60S ribosomal protein L40 n=1 Tax=Puccinia graminis f. sp. tritici CRL 75-36-700-3 RepID=E3KFB8_PUCGT 2.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: multidrug resistance protein abc transporter family 3.39677e-11
Putative N-terminus
uagpf_v2_unigene15923 uagpf v2.0 302
• AutoFact: ubiquitin [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene19134 uagpf v2.0 423
• AutoFact: NEDD8-like protein RUB1 [Arabidopsis thaliana] sp|Q9SHE7.3|RUB1_ARATH RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=Ubiquitin-related protein 1; Short=AtR 7.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 2 0.0
N-terminus
uagpf_v2_unigene19236 uagpf v2.0 573
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin fusion protein 0.0
Complete
uagpf_v2_unigene20432 uagpf v2.0 385
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene20437 uagpf v2.0 816
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 10 0.0
N-terminus
uagpf_v2_unigene20525 uagpf v2.0 821
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Ubiquitin; Hevea brasiliensis (Para rubber tree) (Siphonia brasiliensis). 0.0
• Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20526 uagpf v2.0 703
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20527 uagpf v2.0 659
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
Complete
uagpf_v2_unigene20529 uagpf v2.0 426
• AutoFact: polyubiquitin [Volvox carteri f. nagariensis] 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 3 0.0
Putative Complete
uagpf_v2_unigene20530 uagpf v2.0 533
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Polyubiquitin; Volvox carteri (Green alga). 0.0
• Blast2go: hexaubiquitin protein 0.0
Complete
uagpf_v2_unigene20531 uagpf v2.0 369
• AutoFact: Polyubiquitin 14 n=9 Tax=core eudicotyledons RepID=UBQ14_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 10 0.0
Putative Complete
uagpf_v2_unigene20532 uagpf v2.0 476
• AutoFact: Ubiquitin family protein n=3 Tax=Tetrahymena thermophila RepID=UPI00006CC966 0.0
• FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: polyubiquitin 0.0
Putative Complete
uagpf_v2_unigene20533 uagpf v2.0 527
• AutoFact: RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor sp|P0CH05.1|UBI2P_PETCR RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA45621.1| polyubiquitin [Petroselinum crispum] emb|CAA45622.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: polyubiquitin 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain