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Assembly Name: uagpf v2.0

Name: Zinc finger, U1-C type

Term: IPR013085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2326 uagpf v2.0 660
AutoFact: zinc finger, matrin type 5 [Danio rerio] 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding zinc ion binding protein 0.0
Complete
uagpf_v2_unigene2586 uagpf v2.0 1688
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 0.0
Complete
uagpf_v2_unigene4777 uagpf v2.0 465
AutoFact: Nucleic acid binding protein n=3 Tax=Andropogoneae RepID=B6U4V4_MAIZE 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding protein 0.0
N-terminus
uagpf_v2_unigene6037 uagpf v2.0 570
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 2.99312e-28
unknown
uagpf_v2_unigene18742 uagpf v2.0 1466
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c-type u1 snrnp 0.0
Complete
uagpf_v2_unigene34890 uagpf v2.0 376
AutoFact: Nucleic acid binding protein n=3 Tax=Andropogoneae RepID=B6U4V4_MAIZE 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding protein 0.0
Internal
uagpf_v2_unigene54901 uagpf v2.0 459
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 7.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain