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Assembly Name: uagpf v2.0

Name: Fibrillarin

Term: IPR000692  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1070 uagpf v2.0 368
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene1641 uagpf v2.0 1078
AutoFact: Probable fibrillarin (Fragment) n=2 Tax=Picea RepID=O65058_PICMA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12252 uagpf v2.0 799
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.68156e-44
Putative Complete
uagpf_v2_unigene13669 uagpf v2.0 627
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
N-terminus
uagpf_v2_unigene14201 uagpf v2.0 760
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
Putative coding
uagpf_v2_unigene14951 uagpf v2.0 1113
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.68156e-44
Complete
uagpf_v2_unigene15183 uagpf v2.0 757
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
Blast2go: rna-binding protein 1.68156e-44
Coding
uagpf_v2_unigene15842 uagpf v2.0 687
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene19338 uagpf v2.0 304
AutoFact: Multispanning membrane protein-like n=6 Tax=Arabidopsis RepID=Q9LIC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
Internal
uagpf_v2_unigene19854 uagpf v2.0 2732
AutoFact: Multispanning membrane protein-like n=6 Tax=Arabidopsis RepID=Q9LIC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
Complete
uagpf_v2_unigene20097 uagpf v2.0 1797
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
Complete
uagpf_v2_unigene29274 uagpf v2.0 342
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
Putative coding
uagpf_v2_unigene30151 uagpf v2.0 123
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene30495 uagpf v2.0 349
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
Blast2go: rna-binding protein 0.0
unknown
uagpf_v2_unigene30594 uagpf v2.0 567
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: rna-binding protein 1.68156e-44
Internal
uagpf_v2_unigene36688 uagpf v2.0 452
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
N-terminus
uagpf_v2_unigene40514 uagpf v2.0 357
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Internal
uagpf_v2_unigene41610 uagpf v2.0 307
AutoFact: [I] COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 0.0
Blast2go: oxidoreductase glyr1-like 0.0
unknown
uagpf_v2_unigene49808 uagpf v2.0 313
AutoFact: THO complex subunit 4 [Arabidopsis thaliana] emb|CAB85990.1| putative protein [Arabidopsis thaliana] gb|AED90486.1| THO complex subunit 4 [Arabidopsis thaliana] 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna and export factor binding 0.0
C-terminus
uagpf_v2_unigene55133 uagpf v2.0 349
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain