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Assembly Name: uagpf v2.0

Name: Protein of unknown function DUF1635

Term: IPR012862  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene9643 uagpf v2.0 511
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene11066 uagpf v2.0 566
AutoFact: DUF1635 domain containing protein 7.0e-24
Blast2go: protein 1.54593e-19
Putative coding
uagpf_v2_unigene11922 uagpf v2.0 583
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
C-terminus
uagpf_v2_unigene19628 uagpf v2.0 420
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
N-terminus
uagpf_v2_unigene46152 uagpf v2.0 352
AutoFact: DUF1635 domain containing protein 7.0e-24
Blast2go: protein 1.54593e-19
Coding
uagpf_v2_unigene46504 uagpf v2.0 309
AutoFact: Tetratricopeptide repeat, putative [Oryza sativa Japonica Group] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 7.8875e-26
Internal
uagpf_v2_unigene51835 uagpf v2.0 287
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g74600-like protein 0.0
Internal
uagpf_v2_unigene51944 uagpf v2.0 465
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
FL-Next: tr=15.9 kDa subunit of RNA polymerase II; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
C-terminus
uagpf_v2_unigene52976 uagpf v2.0 246
AutoFact: 15.9 kDa subunit of RNA polymerase II n=8 Tax=core eudicotyledons RepID=O48890_ARATH 0.0
Blast2go: kda subunit of rna polymerase ii 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain