Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Uncharacterised protein family Cys-rich

Term: IPR006461  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13007 uagpf v2.0 720
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene13722 uagpf v2.0 582
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
Putative C-terminus
uagpf_v2_unigene15191 uagpf v2.0 707
AutoFact: PLAC8 family protein [Arabidopsis thaliana] sp|Q9M9A5.1|PCR6_ARATH RecName: Full=Protein PLANT CADMIUM RESISTANCE 6; Short=AtPCR6 gb|AAF69715.1|AC016041_20 F27J15.18 [Arabidopsis thaliana] gb|AAR24706.1| At1g49030 [Arabidopsis thaliana] gb|AAS47652.1| At1 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
Putative Complete
uagpf_v2_unigene16289 uagpf v2.0 564
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
N-terminus
uagpf_v2_unigene16691 uagpf v2.0 1426
AutoFact: PLAC8 domain-containing protein [Arabidopsis thaliana] gb|AAD18148.1| expressed protein [Arabidopsis thaliana] gb|ABD19647.1| At2g37110 [Arabidopsis thaliana] dbj|BAE98458.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09352.1| PLAC8 domain-containi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell number regulator 8-like 0.0
Complete
uagpf_v2_unigene25019 uagpf v2.0 508
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene27168 uagpf v2.0 388
AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAM53291.1| unknown protein [Arabidopsis thaliana] gb|AAM64925.1| unknown [Arabidopsis thaliana] gb|AAN15679.1| unknown protein [Arabidopsis thaliana] gb|AAN41299.1| unknown protein [Arabidopsis thaliana] dbj 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell number regulator 6 0.0
Putative N-terminus
uagpf_v2_unigene29252 uagpf v2.0 214
AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAM61188.1| unknown [Arabidopsis thaliana] gb|ABD91492.1| At1g11380 [Arabidopsis thaliana] gb|AEE28728.1| PLAC8 family protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene29551 uagpf v2.0 361
AutoFact: GQ02818.B7_C13 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02818_C13 5', mRNA sequence. 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.21549e-39
Putative C-terminus
uagpf_v2_unigene30805 uagpf v2.0 390
AutoFact: PLAC8 family protein [Arabidopsis thaliana] gb|AAU44540.1| hypothetical protein AT5G05350 [Arabidopsis thaliana] gb|AED90862.1| PLAC8 family protein [Arabidopsis thaliana] 0.0
Blast2go: plac8 family protein 0.0
Putative coding
uagpf_v2_unigene31920 uagpf v2.0 574
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene32198 uagpf v2.0 276
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal
uagpf_v2_unigene33110 uagpf v2.0 353
AutoFact: Putative polyprotein n=1 Tax=Solanum habrochaites RepID=B3TPP6_SOLHA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac079131_10 copia-type 3.62119e-28
Putative N-terminus
uagpf_v2_unigene36013 uagpf v2.0 569
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene36656 uagpf v2.0 456
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
uagpf_v2_unigene36834 uagpf v2.0 426
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q10NE5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene37512 uagpf v2.0 264
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 3.85357e-43
C-terminus
uagpf_v2_unigene37617 uagpf v2.0 538
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene37736 uagpf v2.0 746
AutoFact: PLAC8 domain containing protein 9.0e-12
Blast2go: plac8 family protein 0.0
Putative coding
uagpf_v2_unigene37833 uagpf v2.0 551
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.7958e-12
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain