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Assembly Name: uagpf v2.0

Name: Ribosomal protein 60S

Term: IPR001813  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6 uagpf v2.0 563
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
Complete
uagpf_v2_unigene6116 uagpf v2.0 638
AutoFact: 60S acidic ribosomal protein P1 [Zea mays] gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays] gb|ACG31544.1| 60S acidic ribosomal protein P1 [Zea mays] gb|ACR38189.1| unknown [Zea mays] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 8.6505e-30
Complete
uagpf_v2_unigene11595 uagpf v2.0 417
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene11632 uagpf v2.0 725
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene11852 uagpf v2.0 648
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
C-terminus
uagpf_v2_unigene14108 uagpf v2.0 870
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
Complete
uagpf_v2_unigene16749 uagpf v2.0 646
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene17347 uagpf v2.0 514
AutoFact: 60S acidic ribosomal protein P3-1 n=2 Tax=Arabidopsis RepID=RLA31_ARATH 5.0e-11
Blast2go: 60s acidic ribosomal protein p3 1.32677e-21
unknown
uagpf_v2_unigene18407 uagpf v2.0 820
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus
uagpf_v2_unigene19312 uagpf v2.0 496
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: sp=60S acidic ribosomal protein P0; Zea mays (Maize). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
N-terminus
uagpf_v2_unigene19651 uagpf v2.0 778
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
C-terminus
uagpf_v2_unigene19950 uagpf v2.0 788
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 3.98882e-30
Complete
uagpf_v2_unigene20095 uagpf v2.0 622
AutoFact: 60s acidic ribosomal protein [Hyacinthus orientalis] 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein 5.95133e-30
Putative Complete
uagpf_v2_unigene20105 uagpf v2.0 965
AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p0 0.0
C-terminus
uagpf_v2_unigene36488 uagpf v2.0 439
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene50018 uagpf v2.0 527
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene51706 uagpf v2.0 425
AutoFact: non-specific phospholipase C6 [Arabidopsis thaliana] dbj|BAC22511.1| phosphatidylglycerol specific phospholipase C [Arabidopsis thaliana] gb|AEE78437.1| non-specific phospholipase C6 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52620 uagpf v2.0 652
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
Complete
uagpf_v2_unigene53250 uagpf v2.0 459
AutoFact: 60S acidic ribosomal protein P1 [Zea mays] gb|AAB71079.1| acidic ribosomal protein P1a [Zea mays] gb|ACG31544.1| 60S acidic ribosomal protein P1 [Zea mays] gb|ACR38189.1| unknown [Zea mays] 2.0e-18
Blast2go: 60s acidic ribosomal protein p1 8.6505e-30
Coding
uagpf_v2_unigene53469 uagpf v2.0 399
AutoFact: Chain t, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome pdb|3IZ5|UU Chain u, Localization Of The Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Tr 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s acidic ribosomal protein p1 1.95579e-29
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain