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Assembly Name: uagpf v2.0

Name: PDZ domain

Term: IPR001478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene968 uagpf v2.0 366
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene1957 uagpf v2.0 719
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene4583 uagpf v2.0 373
AutoFact: Protease Do-like 2, chloroplastic n=4 Tax=Arabidopsis RepID=DEGP2_ARATH 2.0e-28
Blast2go: protease do-like chloroplastic-like 0.0
unknown
uagpf_v2_unigene6776 uagpf v2.0 409
AutoFact: D1 protease precursor [Nicotiana plumbaginifolia] 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: peptidase s41 family protein 4.43897e-21
C-terminus
uagpf_v2_unigene6782 uagpf v2.0 687
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein like sex4 1 0.0
C-terminus
uagpf_v2_unigene7112 uagpf v2.0 455
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
uagpf_v2_unigene7654 uagpf v2.0 1892
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete
uagpf_v2_unigene7739 uagpf v2.0 906
AutoFact: protease Do-like 10 [Arabidopsis thaliana] sp|Q9FIV6.1|DGP10_ARATH RecName: Full=Protease Do-like 10, mitochondrial; Flags: Precursor dbj|BAB11638.1| serine protease-like protein [Arabidopsis thaliana] gb|AAL47441.1| AT5g36950/MLF18_70 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like mitochondrial-like 0.0
Putative Complete
uagpf_v2_unigene8538 uagpf v2.0 493
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Putative N-terminus
uagpf_v2_unigene11452 uagpf v2.0 675
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
uagpf_v2_unigene12556 uagpf v2.0 608
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
Blast2go: protease do-like 7-like 0.0
unknown
uagpf_v2_unigene15370 uagpf v2.0 752
AutoFact: Serine protease htra2, putative n=1 Tax=Ricinus communis RepID=B9RF97_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 14-like 0.0
C-terminus
uagpf_v2_unigene15472 uagpf v2.0 690
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
Blast2go: protease do-like 9-like 0.0
unknown
uagpf_v2_unigene17006 uagpf v2.0 1135
AutoFact: 26S proteasome non-ATPase regulatory subunit 9 [Arabidopsis thaliana] gb|AAM65312.1| 26S proteasome regulatory subunit p27, putative [Arabidopsis thaliana] dbj|BAC43064.1| unknown protein [Arabidopsis thaliana] gb|AAO63310.1| At5g57950 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 9 0.0
Complete
uagpf_v2_unigene17992 uagpf v2.0 784
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative C-terminus
uagpf_v2_unigene26344 uagpf v2.0 652
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
Blast2go: protease do-like 7-like 0.0
unknown
uagpf_v2_unigene27026 uagpf v2.0 399
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Internal
uagpf_v2_unigene27653 uagpf v2.0 359
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
uagpf_v2_unigene29817 uagpf v2.0 455
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
Internal
uagpf_v2_unigene30126 uagpf v2.0 384
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain