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Assembly Name: uagpf v2.0

Name: PDZ domain

Term: IPR001478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30827 uagpf v2.0 339
AutoFact: Peptidase M50-like protein n=3 Tax=Arabidopsis RepID=O23053_ARATH 2.0e-29
Blast2go: serine protease 1.95341e-42
unknown
uagpf_v2_unigene30964 uagpf v2.0 342
AutoFact: rubredoxin family protein [Arabidopsis thaliana] dbj|BAB10504.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59624.1| unknown protein [Arabidopsis thaliana] gb|AAN41384.1| unknown protein [Arabidopsis thaliana] gb|AED92391.1| rubredoxin family pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene35431 uagpf v2.0 251
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37180 uagpf v2.0 445
AutoFact: Serine protease htra2, putative n=1 Tax=Ricinus communis RepID=B9RF97_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 14-like 0.0
N-terminus
uagpf_v2_unigene38165 uagpf v2.0 538
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38328 uagpf v2.0 496
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
C-terminus
uagpf_v2_unigene39055 uagpf v2.0 423
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 4.0e-10
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative C-terminus
uagpf_v2_unigene39521 uagpf v2.0 441
AutoFact: Protease Do-like 1, chloroplastic n=2 Tax=Arabidopsis RepID=DEGP1_ARATH 0.0
Blast2go: serine-type peptidase 0.0
unknown
uagpf_v2_unigene40347 uagpf v2.0 381
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
uagpf_v2_unigene44278 uagpf v2.0 273
AutoFact: protease Do-like 8 [Arabidopsis thaliana] sp|Q9LU10.1|DEGP8_ARATH RecName: Full=Protease Do-like 8, chloroplastic; Flags: Precursor dbj|BAA98101.1| unnamed protein product [Arabidopsis thaliana] gb|AAL08237.1| AT5g39830/K13H13_10 [Arabidopsis thaliana] gb 0.0
Blast2go: protease do-like 8 0.0
unknown
uagpf_v2_unigene46257 uagpf v2.0 298
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene46677 uagpf v2.0 223
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48582 uagpf v2.0 251
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: sp=Protease Do-like 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-type peptidase 0.0
Internal
uagpf_v2_unigene49079 uagpf v2.0 302
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene49463 uagpf v2.0 360
AutoFact: Peptidase S41 family protein [Arabidopsis thaliana] gb|AAL11596.1|AF424602_1 AT4g17740/dl4905c [Arabidopsis thaliana] emb|CAB10554.1| PSII D1 protein processing enzyme [Arabidopsis thaliana] emb|CAB78777.1| PSII D1 protein processing enzyme [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
Internal
uagpf_v2_unigene51460 uagpf v2.0 317
AutoFact: 26S proteasome non-ATPase regulatory subunit 9 [Arabidopsis thaliana] gb|AAM65312.1| 26S proteasome regulatory subunit p27, putative [Arabidopsis thaliana] dbj|BAC43064.1| unknown protein [Arabidopsis thaliana] gb|AAO63310.1| At5g57950 [Arabidopsis thalia 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 9 0.0
unknown
uagpf_v2_unigene54022 uagpf v2.0 698
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain