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Assembly Name: uagpf v2.0

Name: Intron-encoded nuclease 2

Term: IPR003611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10237 uagpf v2.0 339
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hypothetical protein VITISV_016106 [Vitis vinifera] 1.64214e-16
Putative N-terminus
uagpf_v2_unigene20375 uagpf v2.0 465
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
C-terminus
uagpf_v2_unigene27351 uagpf v2.0 484
AutoFact: WS0273.B21_L06 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0273_L06 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: numod3 motif family expressed 0.0
Putative N-terminus
uagpf_v2_unigene28110 uagpf v2.0 376
AutoFact: RVT_1 domain containing protein 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac051624_3 retroelement 0.0
Putative Complete
uagpf_v2_unigene28808 uagpf v2.0 433
AutoFact: RVT_1 domain containing protein 3.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: ac051624_3 retroelement 0.0
N-terminus
uagpf_v2_unigene46553 uagpf v2.0 349
AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 7.0e-26
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 6.20541e-30
Putative C-terminus
uagpf_v2_unigene55017 uagpf v2.0 203
AutoFact: Unassigned protein
Blast2go: disease resistance protein 7.31522e-29
unknown
uagpf_v2_unigene56001 uagpf v2.0 709
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
Putative Complete
uagpf_v2_unigene56002 uagpf v2.0 361
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 1.99965e-42
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 0.0
C-terminus
uagpf_v2_unigene56043 uagpf v2.0 408
AutoFact: Chromo domain containing protein 0.0001
Blast2go: retrotransposon unclassified 0.0
unknown
uagpf_v2_unigene56069 uagpf v2.0 446
AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Putative C-terminus
uagpf_v2_unigene56074 uagpf v2.0 374
AutoFact: Retrotransposon protein, putative, unclassified n=5 Tax=Oryza sativa RepID=Q2QQD0_ORYSJ 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.88373e-28
Internal
uagpf_v2_unigene56082 uagpf v2.0 382
AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 0.0
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain