Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Ribosomal protein S13, conserved site

Term: IPR018269  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12432 uagpf v2.0 834
AutoFact: 30S ribosomal protein S13 [Arabidopsis thaliana] sp|P42732.1|RR13_ARATH RecName: Full=30S ribosomal protein S13, chloroplastic; AltName: Full=CS13; Flags: Precursor emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] emb|CAA88028. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s13 0.0
Complete
uagpf_v2_unigene16448 uagpf v2.0 718
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
Complete
uagpf_v2_unigene17488 uagpf v2.0 537
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
N-terminus
uagpf_v2_unigene19686 uagpf v2.0 458
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
N-terminus
uagpf_v2_unigene19874 uagpf v2.0 1043
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
Complete
uagpf_v2_unigene36053 uagpf v2.0 522
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
C-terminus
uagpf_v2_unigene46238 uagpf v2.0 416
AutoFact: Ribosomal protein S13, mitochondrial n=14 Tax=Magnoliophyta RepID=RT13_DAUCA 3.99931e-42
FL-Next: sp=Ribosomal protein S13, mitochondrial; Daucus carota (Carrot). Mitochondrion. 0.0
Blast2go: ribosomal protein s13 5.00264e-43
Putative N-terminus
uagpf_v2_unigene53183 uagpf v2.0 548
AutoFact: putative ribosomal protein S18 [Oryza sativa Japonica Group] dbj|BAD30789.1| putative ribosomal protein S18 [Oryza sativa Japonica Group] gb|EAZ38860.1| hypothetical protein OsJ_23277 [Oryza sativa Japonica Group] 8.0e-07
unknown
uagpf_v2_unigene53787 uagpf v2.0 370
AutoFact: 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_192718.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|NP_564434.1| 40S ribosomal protein S18 [Arabidopsis thaliana] ref|XP_002872461.1| hypothetical protein ARALYDRAFT_489832 [Arabidopsis ly 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pointed first leaf 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain