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Assembly Name: uagpf v2.0

Name: YTH domain

Term: IPR007275  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene950 uagpf v2.0 398
AutoFact: Domains rearranged methyltransferase n=3 Tax=Nicotiana RepID=B1GYI2_NICSY 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: domains rearranged methyltransferase 0.0
Putative C-terminus
uagpf_v2_unigene1291 uagpf v2.0 604
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene2375 uagpf v2.0 493
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Putative Complete
uagpf_v2_unigene2530 uagpf v2.0 520
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene3984 uagpf v2.0 793
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Yth domain-containing protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene4436 uagpf v2.0 478
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yt521-b-like protein 0.0
unknown
uagpf_v2_unigene6349 uagpf v2.0 1965
AutoFact: pfam04146, YTH, YT521-B-like domain 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
N-terminus
uagpf_v2_unigene8604 uagpf v2.0 487
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
Coding
uagpf_v2_unigene8931 uagpf v2.0 434
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 9.99995e-41
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna methyltransferase 0.0
Putative C-terminus
uagpf_v2_unigene11881 uagpf v2.0 2621
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Complete
uagpf_v2_unigene18608 uagpf v2.0 1122
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene18875 uagpf v2.0 548
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene19263 uagpf v2.0 688
AutoFact: Similar to YT521-B-like family domain containing protein (Fragment) n=1 Tax=Triticum aestivum RepID=D8L9K6_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
uagpf_v2_unigene19487 uagpf v2.0 1015
AutoFact: pfam04146, YTH, YT521-B-like domain 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain-containing 0.0
C-terminus
uagpf_v2_unigene25068 uagpf v2.0 451
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene25191 uagpf v2.0 676
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
unknown
uagpf_v2_unigene26167 uagpf v2.0 247
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
uagpf_v2_unigene26583 uagpf v2.0 384
AutoFact: cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis thaliana] sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30; AltName: Full=Zinc finger CCCH domain-containing protein 11; Short=AtC3H11 gb|ABX260 0.0
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: cleavage and polyadenylation specificity factor cpsf30 0.0
Internal
uagpf_v2_unigene26992 uagpf v2.0 220
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yt521-b-like protein 0.0
unknown
uagpf_v2_unigene28541 uagpf v2.0 489
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain