Sustainpine_db
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Assembly Name: uagpf v2.0

Name: tRNA-dihydrouridine synthase, conserved site

Term: IPR018517  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4011 uagpf v2.0 633
AutoFact: tRNA-dihydrouridine synthase 3-like n=3 Tax=Arabidopsis RepID=DUS3L_ARATH 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna-dihydrouridine synthase 3-like protein 0.0
C-terminus
uagpf_v2_unigene7097 uagpf v2.0 545
AutoFact: tRNA-dihydrouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SVS8_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: trna-dihydrouridine synthase 1-like 0.0
N-terminus
uagpf_v2_unigene25479 uagpf v2.0 543
AutoFact: tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana] dbj|BAB10956.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83641.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AAM26724.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AED98315.1| tRNA-dihy 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g029830; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene37661 uagpf v2.0 432
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 9.80909e-45
Internal
uagpf_v2_unigene41998 uagpf v2.0 443
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene44016 uagpf v2.0 320
AutoFact: RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H50 emb|CAB38623.1| putative protein [Arabidopsis thaliana] emb|CAB80552.1| putative protein [Arabidopsis thaliana] 0.0
Blast2go: trna-dihydrouridine synthase 3-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain