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Assembly Name: uagpf v2.0

Name: Choline transporter-like

Term: IPR007603  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3747 uagpf v2.0 877
AutoFact: Protein PNS1, putative n=1 Tax=Ricinus communis RepID=B9ST27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plasma-membrane choline transporter-like protein 0.0
Internal
uagpf_v2_unigene3990 uagpf v2.0 699
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
C-terminus
uagpf_v2_unigene4024 uagpf v2.0 589
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
Internal
uagpf_v2_unigene5445 uagpf v2.0 542
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
Internal
uagpf_v2_unigene8840 uagpf v2.0 421
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
C-terminus
uagpf_v2_unigene11504 uagpf v2.0 2497
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene17353 uagpf v2.0 805
AutoFact: Protein PNS1, putative n=1 Tax=Ricinus communis RepID=B9ST27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: plasma-membrane choline transporter-like protein 0.0
Complete
uagpf_v2_unigene19264 uagpf v2.0 614
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein pns1 0.0
C-terminus
uagpf_v2_unigene26408 uagpf v2.0 400
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
Internal
uagpf_v2_unigene29625 uagpf v2.0 625
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 0.0
FL-Next: tr=Plasma-membrane choline transporter family protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene31751 uagpf v2.0 445
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_64.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7T395_VITVI 0.0
Blast2go: protein pns1 0.0
unknown
uagpf_v2_unigene37913 uagpf v2.0 385
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
Internal
uagpf_v2_unigene44269 uagpf v2.0 412
AutoFact: Protein PNS1, putative n=1 Tax=Ricinus communis RepID=B9ST27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: plasma-membrane choline transporter-like protein 0.0
Internal
uagpf_v2_unigene46269 uagpf v2.0 396
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AED91938.1| Plasma-membrane choline transporter family protein [Arabidopsis thaliana] 3.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein pns1 3.44745e-15
Internal
uagpf_v2_unigene47733 uagpf v2.0 297
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein Sb06g033190; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: choline transporter-like protein 2-like 0.0
N-terminus
uagpf_v2_unigene50764 uagpf v2.0 250
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_14.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=E0CSM5_VITVI 0.0
Blast2go: choline transporter-like protein 2-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain