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Assembly Name: uagpf v2.0

Name: GH3 auxin-responsive promoter

Term: IPR004993  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1458 uagpf v2.0 494
AutoFact: GH3 family protein n=3 Tax=Malpighiales RepID=B9I058_POPTR 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 0.0
Internal
uagpf_v2_unigene2512 uagpf v2.0 521
AutoFact: Probable indole-3-acetic acid-amido synthetase GH3.5 n=3 Tax=Oryza sativa RepID=GH35_ORYSJ 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
unknown
uagpf_v2_unigene2928 uagpf v2.0 704
AutoFact: Auxin-induced GH3 protein n=1 Tax=Pinus pinaster RepID=Q4LAM0_PINPS 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
N-terminus
uagpf_v2_unigene4251 uagpf v2.0 959
AutoFact: Auxin responsive GH3-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZF61_PICSI 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin responsive gh3-like protein 0.0
C-terminus
uagpf_v2_unigene7839 uagpf v2.0 586
AutoFact: Indole-3-acetic acid-amido synthetase GH3.5 n=6 Tax=Brassicaceae RepID=GH35_ARATH 3.00004e-41
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 0.0
N-terminus
uagpf_v2_unigene13341 uagpf v2.0 582
AutoFact: Auxin-induced GH3 protein n=1 Tax=Pinus pinaster RepID=Q4LAM0_PINPS 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: indole-3-acetic acid-amido synthetase 0.0
C-terminus
uagpf_v2_unigene14863 uagpf v2.0 971
AutoFact: pfam03321, GH3, GH3 auxin-responsive promoter 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
C-terminus
uagpf_v2_unigene25674 uagpf v2.0 512
AutoFact: pfam03321, GH3, GH3 auxin-responsive promoter 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
Internal
uagpf_v2_unigene35867 uagpf v2.0 271
AutoFact: indole-3-acetic acid-amido synthetase GH3.17 [Arabidopsis thaliana] sp|Q9FZ87.1|GH317_ARATH RecName: Full=Indole-3-acetic acid-amido synthetase GH3.17; AltName: Full=Auxin-responsive GH3-like protein 17; Short=AtGH3-17 gb|AAF98442.1|AC021044_21 Unknown pr 2.0e-32
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gh3 family protein 6.38558e-40
N-terminus
uagpf_v2_unigene37525 uagpf v2.0 619
AutoFact: Indole-3-acetic acid-amido synthetase GH3.17, putative n=1 Tax=Ricinus communis RepID=B9RG18_RICCO 0.0
FL-Next: tr=Auxin-induced GH3 protein; Pinus pinaster (Maritime pine). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain