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Assembly Name: uagpf v2.0

Name: DNA topoisomerase I, active site

Term: IPR018521  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene11707 uagpf v2.0 352
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
• Blast2go: dna topoisomerase i 0.0
Internal
uagpf_v2_unigene14321 uagpf v2.0 840
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase i 0.0
C-terminus
uagpf_v2_unigene14529 uagpf v2.0 565
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
unknown
uagpf_v2_unigene16179 uagpf v2.0 1585
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
uagpf_v2_unigene28173 uagpf v2.0 328
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
• Blast2go: dna topoisomerase i 0.0
Internal
uagpf_v2_unigene36349 uagpf v2.0 381
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
Coding
uagpf_v2_unigene37534 uagpf v2.0 422
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
Coding
uagpf_v2_unigene42442 uagpf v2.0 276
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase i 0.0
Internal
uagpf_v2_unigene44618 uagpf v2.0 315
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase i 0.0
Internal
uagpf_v2_unigene45096 uagpf v2.0 353
• AutoFact: Unassigned protein
• FL-Next: sp=F-box protein At1g78280; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein at1g78280-like 2.06282e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain