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Assembly Name: uagpf v2.0

Name: NLI interacting factor

Term: IPR004274  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2445 uagpf v2.0 623
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Coding
uagpf_v2_unigene2600 uagpf v2.0 918
AutoFact: translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] gb|ABF59254.1| unknown protein [Arabidopsis thaliana] gb|AED92716.1| translation initiation factor eIF-2B gamma subunit [Arabidopsis thaliana] 0.0
FL-Next: tr=Translation initiation factor eif-2b gamma subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: translation initiation factor eif-2b subunit gamma-like 0.0
C-terminus
uagpf_v2_unigene2612 uagpf v2.0 710
AutoFact: Carboxy-terminal domain RNA polymerase II polypeptide a small phosphatase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC25_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nli interacting factor family protein 0.0
Putative C-terminus
uagpf_v2_unigene4433 uagpf v2.0 623
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 4-like 0.0
C-terminus
uagpf_v2_unigene5365 uagpf v2.0 769
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
C-terminus
uagpf_v2_unigene5570 uagpf v2.0 948
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6540 uagpf v2.0 875
AutoFact: Ubiquitin-like domain-containing CTD phosphatase (Fragment) n=1 Tax=Solanum nigrum RepID=F4YBD0_SOLNI 2.0e-17
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like domain-containing ctd phosphatase 3.67241e-20
N-terminus
uagpf_v2_unigene7143 uagpf v2.0 695
AutoFact: [K] COG5190 TFIIF-interacting CTD phosphatases, including NLI-interacting factor 2.0e-07
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 3-like 0.0
C-terminus
uagpf_v2_unigene7700 uagpf v2.0 545
AutoFact: Zinc ion binding protein, putative n=1 Tax=Ricinus communis RepID=B9RR35_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: senescence-associated-like protein 0.0
C-terminus
uagpf_v2_unigene9195 uagpf v2.0 1023
AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] emb|CAB87850.1| putative protein [Arabidopsis thaliana] gb|AAM20657.1| putative protein [Arabidopsis thaliana] gb|AAM61626.1| unknown [Arabidopsis thaliana] gb|AAN15623. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ctd small phosphatase-like protein 0.0
C-terminus
uagpf_v2_unigene9351 uagpf v2.0 445
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Internal
uagpf_v2_unigene12980 uagpf v2.0 504
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
unknown
uagpf_v2_unigene13529 uagpf v2.0 940
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scp1-like small phosphatase 5 0.0
N-terminus
uagpf_v2_unigene13606 uagpf v2.0 887
AutoFact: NIF domain containing protein 1.0e-17
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene14998 uagpf v2.0 506
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scp1-like small phosphatase 5 0.0
C-terminus
uagpf_v2_unigene15601 uagpf v2.0 647
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
uagpf_v2_unigene16034 uagpf v2.0 834
AutoFact: mitochondrial import inner membrane translocase subunit TIM50 [Arabidopsis thaliana] sp|Q8VYE2.1|TIM50_ARATH RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50; AltName: Full=Protein EMBRYO DEFECTIVE 1860; Flags: Precursor gb|AAL5 0.0
FL-Next: sp=Mitochondrial import inner membrane translocase subunit TIM50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim50-like 0.0
C-terminus
uagpf_v2_unigene17038 uagpf v2.0 597
AutoFact: RNA polymerase II C-terminal domain phosphatase-like 4 [Arabidopsis thaliana] sp|Q00IB6.1|CPL4_ARATH RecName: Full=RNA polymerase II C-terminal domain phosphatase-like 4; Short=FCP-like 4; AltName: Full=Carboxyl-terminal phosphatase-like 4; Short=AtCPL4; 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 4-like 0.0
Coding
uagpf_v2_unigene17840 uagpf v2.0 754
AutoFact: ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana] sp|Q8W3M6.1|UBCP_ARATH RecName: Full=Ubiquitin-like domain-containing CTD phosphatase dbj|BAB83612.1| unknown protein [Arabidopsis thaliana] gb|AEE82552.1| ubiquitin-like domain-conta 0.0
FL-Next: sp=Ubiquitin-like domain-containing CTD phosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin-like domain-containing ctd phosphatase 0.0
C-terminus
uagpf_v2_unigene18682 uagpf v2.0 963
AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain