Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Transcription factor IIA, beta-barrel

Term: IPR009088  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene4320 uagpf v2.0 640
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Internal
uagpf_v2_unigene12085 uagpf v2.0 588
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Putative N-terminus
uagpf_v2_unigene14359 uagpf v2.0 678
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus
uagpf_v2_unigene17070 uagpf v2.0 910
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus
uagpf_v2_unigene17469 uagpf v2.0 861
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 0.0
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor iia small subunit 0.0
Complete
uagpf_v2_unigene25352 uagpf v2.0 428
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
N-terminus
uagpf_v2_unigene28995 uagpf v2.0 427
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Internal
uagpf_v2_unigene52335 uagpf v2.0 274
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus
uagpf_v2_unigene52361 uagpf v2.0 479
• AutoFact: Transcription initiation factor IIA subunit 2 n=1 Tax=Picea sitchensis RepID=A9NRE0_PICSI 6.0e-16
• FL-Next: sp=Transcription initiation factor IIA subunit 2; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor iia small subunit 4.55543e-20
C-terminus
uagpf_v2_unigene53140 uagpf v2.0 243
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Internal
uagpf_v2_unigene53477 uagpf v2.0 251
• AutoFact: transcription initiation factor TFIIA large subunit [Arabidopsis thaliana] gb|AAL11553.1|AF424559_1 At1g07470/F22G5_13 [Arabidopsis thaliana] gb|AAK64164.1| putative transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAK83596.1| At1g07470/F2 7.00649e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain