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Assembly Name: uagpf v2.0

Name: Zinc finger, HIT-type

Term: IPR007529  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2212 uagpf v2.0 784
AutoFact: zf-UBP domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
C-terminus
uagpf_v2_unigene5963 uagpf v2.0 800
AutoFact: HIT-type zinc finger protein [Arabidopsis thaliana] dbj|BAD44383.1| unnamed protein product [Arabidopsis thaliana] gb|ABE77402.1| At4g28820 [Arabidopsis thaliana] gb|AEE85550.1| HIT-type zinc finger protein [Arabidopsis thaliana] 8.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene10428 uagpf v2.0 1000
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 42; Arabidopsis thaliana (Mouse-ear cress). 0.0
N-terminus
uagpf_v2_unigene12955 uagpf v2.0 901
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene13893 uagpf v2.0 690
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.77034e-34
C-terminus
uagpf_v2_unigene25502 uagpf v2.0 482
AutoFact: HIT zinc finger family protein n=5 Tax=Andropogoneae RepID=B6TE25_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein OSJNBb0018B10.17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger hit domain-containing protein 2-like 0.0
C-terminus
uagpf_v2_unigene30397 uagpf v2.0 311
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
unknown
uagpf_v2_unigene31088 uagpf v2.0 220
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene31248 uagpf v2.0 487
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene39249 uagpf v2.0 476
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Putative N-terminus
uagpf_v2_unigene40809 uagpf v2.0 291
AutoFact: zinc finger protein [Nicotiana benthamiana] 2.0e-12
Blast2go: zinc finger hit domain-containing protein 1 8.55523e-32
unknown
uagpf_v2_unigene41081 uagpf v2.0 320
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
unknown
uagpf_v2_unigene48649 uagpf v2.0 356
AutoFact: pfam04438, zf-HIT, HIT zinc finger 8.0e-11
Blast2go: zinc finger hit domain-containing protein 2-like 1.32342e-20
unknown
uagpf_v2_unigene49439 uagpf v2.0 295
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RRH5_RICCO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger hit domain-containing protein 1 2.8026e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain