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Assembly Name: uagpf v2.0

Name: Ribonuclease III domain

Term: IPR000999  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2700 uagpf v2.0 357
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene8581 uagpf v2.0 315
AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Internal
uagpf_v2_unigene8859 uagpf v2.0 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 6.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 6.85019e-14
Internal
uagpf_v2_unigene10491 uagpf v2.0 666
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
Blast2go: ufd1 like protein 0.0
unknown
uagpf_v2_unigene11420 uagpf v2.0 354
AutoFact: calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] sp|Q0WVZ1.1|Y3330_ARATH RecName: Full=Putative metallophosphoesterase At3g03305; Flags: Precursor dbj|BAE98707.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73927.1| calci 3.0e-38
FL-Next: sp=Putative metallophosphoesterase At3g03305; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: metallophosphoesterase at3g03305-like 0.0
Putative N-terminus
uagpf_v2_unigene11945 uagpf v2.0 1132
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene15114 uagpf v2.0 796
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene15229 uagpf v2.0 604
AutoFact: Ribonuclease III-like protein [Arabidopsis thaliana] gb|AAQ62445.1| At1g55140 [Arabidopsis thaliana] dbj|BAD42926.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33190.1| Ribonuclease III-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene17738 uagpf v2.0 1455
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
Complete
uagpf_v2_unigene27691 uagpf v2.0 376
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
N-terminus
uagpf_v2_unigene28295 uagpf v2.0 559
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ufd1 like protein 0.0
Internal
uagpf_v2_unigene33475 uagpf v2.0 424
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene33736 uagpf v2.0 246
AutoFact: Endoribonuclease Dicer homolog 1 n=4 Tax=Poaceae RepID=DCL1_ORYSJ 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Coding
uagpf_v2_unigene37490 uagpf v2.0 411
AutoFact: calcineurin-like metallo-phosphoesterase-like protein [Arabidopsis thaliana] sp|Q0WVZ1.1|Y3330_ARATH RecName: Full=Putative metallophosphoesterase At3g03305; Flags: Precursor dbj|BAE98707.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73927.1| calci 0.0
FL-Next: sp=Putative metallophosphoesterase At3g03305; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: metallophosphoesterase at3g03305-like 0.0
Internal
uagpf_v2_unigene41223 uagpf v2.0 321
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene44390 uagpf v2.0 418
AutoFact: Ribonuclease III [Medicago truncatula] 4.0e-21
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: ribonuclease iii-like protein 9.27072e-29
Putative N-terminus
uagpf_v2_unigene47318 uagpf v2.0 172
AutoFact: Dicer-like protein n=1 Tax=Populus trichocarpa RepID=B9GRS6_POPTR 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene47989 uagpf v2.0 307
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene48091 uagpf v2.0 313
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ufd1 like protein 0.0
Internal
uagpf_v2_unigene52052 uagpf v2.0 624
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 1.71932e-34
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain