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Assembly Name: uagpf v2.0

Name: K Homology domain, type 2

Term: IPR004044  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene683 uagpf v2.0 612
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene3421 uagpf v2.0 551
AutoFact: DYW8 protein (Fragment) n=1 Tax=Arabidopsis thaliana RepID=Q9M4P5_ARATH 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.485e-19
Putative N-terminus
uagpf_v2_unigene7405 uagpf v2.0 558
AutoFact: putative GTP-binding protein ERG [Oryza sativa Japonica Group] 0.0
Blast2go: gtp-binding protein erg 0.0
unknown
uagpf_v2_unigene11980 uagpf v2.0 1047
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger protein 0.0
C-terminus
uagpf_v2_unigene14970 uagpf v2.0 538
AutoFact: Caprin-1_C multi-domain protein 6.0e-09
Blast2go: zinc finger protein 1.05389e-34
unknown
uagpf_v2_unigene16408 uagpf v2.0 892
AutoFact: DUF1421 multi-domain protein 9.0e-18
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: zinc finger protein 0.0
N-terminus
uagpf_v2_unigene18690 uagpf v2.0 833
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 3.77342e-21
C-terminus
uagpf_v2_unigene19537 uagpf v2.0 943
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene19749 uagpf v2.0 1031
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene19780 uagpf v2.0 817
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene20014 uagpf v2.0 724
AutoFact: Chain B, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene25831 uagpf v2.0 433
AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase era-like 0.0
C-terminus
uagpf_v2_unigene26866 uagpf v2.0 268
AutoFact: pentatricopeptide, putative [Oryza sativa Japonica Group] gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group] 2.0e-37
Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 0.0
unknown
uagpf_v2_unigene28174 uagpf v2.0 544
AutoFact: Unassigned protein
Blast2go: pentatricopeptide repeat-containing protein at3g49142-like 0.0
Putative coding
uagpf_v2_unigene29551 uagpf v2.0 361
AutoFact: GQ02818.B7_C13 GQ028 - Cambium / phloem scrappings (Normalized library ) Picea glauca cDNA clone GQ02818_C13 5', mRNA sequence. 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 2.21549e-39
Putative C-terminus
uagpf_v2_unigene32198 uagpf v2.0 276
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V0_PICAB 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal
uagpf_v2_unigene32207 uagpf v2.0 350
AutoFact: putative GTP-binding protein ERG [Oryza sativa Japonica Group] 0.0
FL-Next: sp=GTP-binding protein ERG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp-binding protein erg 0.0
Putative C-terminus
uagpf_v2_unigene37481 uagpf v2.0 557
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230-like 1.54071e-30
C-terminus
uagpf_v2_unigene37512 uagpf v2.0 264
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 3.85357e-43
C-terminus
uagpf_v2_unigene39093 uagpf v2.0 426
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dyw9 protein 2.32037e-31
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain