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Assembly Name: uagpf v2.0

Name: Cytochrome c oxidase biogenesis protein Cmc1-like

Term: IPR013892  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene39483 uagpf v2.0 308
AutoFact: cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana] ref|NP_001078418.1| cytochrome c oxidase biogenesis protein Cmc1-like protein [Arabidopsis thaliana] dbj|BAE99808.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84418.1 2.0e-27
FL-Next: tr=Putative uncharacterized protein Sb06g017710; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: cytochrome c oxidase biogenesis protein cmc1-like protein 1.14144e-38
N-terminus
uagpf_v2_unigene39769 uagpf v2.0 318
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 0.0
Blast2go: no apical meristem-related protein 0.0
Putative coding
uagpf_v2_unigene46574 uagpf v2.0 397
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
Blast2go: nac domain protein 0.0
unknown
uagpf_v2_unigene49683 uagpf v2.0 532
AutoFact: NAC domain-containing protein 78 [Arabidopsis thaliana] sp|Q84K00.2|NAC78_ARATH RecName: Full=NAC domain-containing protein 78; Short=ANAC078 emb|CAB85547.1| putative protein [Arabidopsis thaliana] gb|AAM20460.1| putative protein [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
C-terminus
uagpf_v2_unigene49921 uagpf v2.0 442
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 0.0
N-terminus
uagpf_v2_unigene50898 uagpf v2.0 260
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 0.0
Blast2go: nac domain ipr003441 0.0
Coding
uagpf_v2_unigene52150 uagpf v2.0 533
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 0.0
Putative Complete
uagpf_v2_unigene52521 uagpf v2.0 343
AutoFact: NAC domain containing protein 28 [Arabidopsis thaliana] gb|AAF06052.1|AC009513_8 Contains similarity to gb|AF123310 NAC domain protein NAM gene from Arabidopsis thaliana gb|AEE34440.1| NAC domain containing protein 28 [Arabidopsis thaliana] 8.99999e-40
Blast2go: nac domain ipr003441 0.0
unknown
uagpf_v2_unigene53580 uagpf v2.0 374
AutoFact: NAC protein n=2 Tax=Oryza sativa RepID=Q8H045_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain protein 0.0
N-terminus
uagpf_v2_unigene53584 uagpf v2.0 368
AutoFact: NAC domain protein, IPR003441 (Fragment) n=2 Tax=Populus trichocarpa RepID=B9I939_POPTR 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nac domain ipr003441 1.9286e-36
N-terminus
uagpf_v2_unigene55148 uagpf v2.0 360
AutoFact: NAC domain protein, IPR003441 n=2 Tax=Populus trichocarpa RepID=A9PDI0_POPTR 0.0
Blast2go: nac domain ipr003441 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain