|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
uagpf_v2_unigene420
|
uagpf v2.0
|
435
|
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene4547
|
uagpf v2.0
|
838
|
|
• AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera]
|
0.0
|
|
Putative N-terminus
|
|
uagpf_v2_unigene6906
|
uagpf v2.0
|
1367
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera]
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene15227
|
uagpf v2.0
|
389
|
|
• AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ95_RICCO
|
0.0
|
|
• Blast2go: nucleic acid binding
|
0.0
|
|
unknown
|
|
uagpf_v2_unigene20360
|
uagpf v2.0
|
596
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
|
uagpf_v2_unigene20365
|
uagpf v2.0
|
1013
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene20379
|
uagpf v2.0
|
1498
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Complete
|
|
uagpf_v2_unigene20407
|
uagpf v2.0
|
1233
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
N-terminus
|
|
uagpf_v2_unigene20416
|
uagpf v2.0
|
901
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
|
uagpf_v2_unigene27851
|
uagpf v2.0
|
629
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene27855
|
uagpf v2.0
|
193
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene32335
|
uagpf v2.0
|
459
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera]
|
0.0
|
|
Putative C-terminus
|
|
uagpf_v2_unigene35168
|
uagpf v2.0
|
367
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_035792 [Vitis vinifera]
|
2.94273e-44
|
|
Internal
|
|
uagpf_v2_unigene35522
|
uagpf v2.0
|
413
|
|
• AutoFact: RVT_2 domain containing protein
|
0.0
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical retrotransposon
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene36527
|
uagpf v2.0
|
416
|
|
• AutoFact: GK15001 gene product from transcript GK15001-RA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_037436 [Vitis vinifera]
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene38204
|
uagpf v2.0
|
461
|
|
• AutoFact: NV19190; similar to pol polyprotein
|
6.0e-14
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: hypothetical protein VITISV_040966 [Vitis vinifera]
|
4.34763e-40
|
|
Putative N-terminus
|
|
uagpf_v2_unigene41998
|
uagpf v2.0
|
443
|
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
|
uagpf_v2_unigene42888
|
uagpf v2.0
|
298
|
|
• AutoFact: rve domain containing protein
|
3.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copia-type polyprotein
|
3.98257e-27
|
|
Internal
|
|
uagpf_v2_unigene47307
|
uagpf v2.0
|
358
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ
|
1.0e-24
|
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
2.00223e-28
|
|
Internal
|
|
uagpf_v2_unigene50270
|
uagpf v2.0
|
410
|
|
• AutoFact: rve domain containing protein
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: polx_tobac ame: full=retrovirus-related pol polyprotein from transposon tnt 1-94 includes: ame: full=protease includes: ame: full=reverse transcriptase includes: ame: full=endonuclease
|
5.5838e-40
|
|
Internal
|
