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Assembly Name: uagpf v2.0

Name: 3'-5' exonuclease domain

Term: IPR002562  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3929 uagpf v2.0 716
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rrp6-like protein 1 0.0
C-terminus
uagpf_v2_unigene4295 uagpf v2.0 634
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
N-terminus
uagpf_v2_unigene8869 uagpf v2.0 1037
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
C-terminus
uagpf_v2_unigene12985 uagpf v2.0 955
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene14151 uagpf v2.0 481
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
Blast2go: werner syndrome-like exonuclease-like 0.0
Putative coding
uagpf_v2_unigene17017 uagpf v2.0 624
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene18455 uagpf v2.0 629
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene25750 uagpf v2.0 445
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: rrp6-like protein 3 0.0
Internal
uagpf_v2_unigene28109 uagpf v2.0 432
AutoFact: 3'-5' exonuclease-related protein n=1 Tax=Arabidopsis thaliana RepID=F4JTU8_ARATH 9.0e-07
FL-Next: sp=Werner Syndrome-like exonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: werner syndrome-like exonuclease 8.71139e-08
C-terminus
uagpf_v2_unigene29379 uagpf v2.0 601
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 9.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
N-terminus
uagpf_v2_unigene32232 uagpf v2.0 309
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
N-terminus
uagpf_v2_unigene36098 uagpf v2.0 577
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
C-terminus
uagpf_v2_unigene38016 uagpf v2.0 529
AutoFact: 3'-5' exonuclease, putative [Arabidopsis thaliana] 3.0e-28
FL-Next: tr=3-5 exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: 3 -5 exonuclease domain-containing protein 1.19604e-36
Internal
uagpf_v2_unigene38908 uagpf v2.0 295
AutoFact: 3'-5' exonuclease, putative n=1 Tax=Ricinus communis RepID=B9SDW9_RICCO 5.0e-40
FL-Next: tr=Putative uncharacterized protein At2g32420; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rrp6-like protein 3 0.0
Internal
uagpf_v2_unigene38927 uagpf v2.0 532
AutoFact: Exosome complex exonuclease RRP6 n=3 Tax=Arabidopsis RepID=A9LLI7_ARATH 3.0e-26
FL-Next: tr=Exosome complex exonuclease RRP6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: exosome component 10-like 4.42875e-29
N-terminus
uagpf_v2_unigene38964 uagpf v2.0 365
AutoFact: 3'-5' exonuclease domain-containing protein-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 -5 exonuclease and kh-i domain-containing protein 0.0
Internal
uagpf_v2_unigene43305 uagpf v2.0 312
AutoFact: 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] dbj|BAB11227.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21257.1| At5g24340 [Arabidopsis thaliana] dbj|BAE99637.1| hypothetical protein [Arabidopsis thaliana] gb|AED93295.1| 3' 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: probable exonuclease mut-7 homolog 3.48117e-37
Putative C-terminus
uagpf_v2_unigene43914 uagpf v2.0 357
AutoFact: Werner Syndrome-like exonuclease [Arabidopsis thaliana] sp|Q84LH3.1|WEX_ARATH RecName: Full=Werner Syndrome-like exonuclease gb|AAO33765.1| Werner Syndrome-like exonuclease [Arabidopsis thaliana] gb|AAR24686.1| At4g13870 [Arabidopsis thaliana] gb|AEE83339 5.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: werner syndrome-like exonuclease 7.90178e-41
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain