Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
uagpf_v2_unigene420
|
uagpf v2.0
|
435
|
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
uagpf_v2_unigene2553
|
uagpf v2.0
|
883
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: sp=5'-3' exoribonuclease 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
N-terminus
|
uagpf_v2_unigene3824
|
uagpf v2.0
|
400
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
Putative coding
|
uagpf_v2_unigene3913
|
uagpf v2.0
|
1238
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene4547
|
uagpf v2.0
|
838
|
• AutoFact: NXRV075_D04_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV075_D04 5' similar to Arabidopsis thaliana sequence At1g37110 see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: hypothetical protein VITISV_011062 [Vitis vinifera]
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene5004
|
uagpf v2.0
|
827
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene6538
|
uagpf v2.0
|
632
|
• AutoFact: NXRV092_H05_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV092_H05 5' similar to Arabidopsis thaliana sequence At2g13930 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence.
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: hypothetical protein VITISV_004415 [Vitis vinifera]
|
0.0
|
|
Internal
|
uagpf_v2_unigene7487
|
uagpf v2.0
|
398
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
2.0e-31
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: reverse transcriptase
|
1.56398e-40
|
|
Internal
|
uagpf_v2_unigene8769
|
uagpf v2.0
|
411
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
|
Internal
|
uagpf_v2_unigene9744
|
uagpf v2.0
|
318
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
• FL-Next: sp=5'-3' exoribonuclease 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
uagpf_v2_unigene11808
|
uagpf v2.0
|
1797
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene13915
|
uagpf v2.0
|
733
|
• AutoFact: 5'-3' exoribonuclease 2 n=2 Tax=Arabidopsis thaliana RepID=XRN2_ARATH
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene20360
|
uagpf v2.0
|
596
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene20365
|
uagpf v2.0
|
1013
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Internal
|
uagpf_v2_unigene20379
|
uagpf v2.0
|
1498
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Complete
|
uagpf_v2_unigene20395
|
uagpf v2.0
|
984
|
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene20407
|
uagpf v2.0
|
1233
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
N-terminus
|
uagpf_v2_unigene20416
|
uagpf v2.0
|
901
|
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Putative N-terminus
|
uagpf_v2_unigene26525
|
uagpf v2.0
|
517
|
• AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group]
|
0.0
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
C-terminus
|
uagpf_v2_unigene27261
|
uagpf v2.0
|
429
|
• AutoFact: 5'-3' exoribonuclease 3 [Arabidopsis thaliana] sp|Q9FQ03.1|XRN3_ARATH RecName: Full=5'-3' exoribonuclease 3; AltName: Full=Protein EXORIBONUCLEASE 3 gb|AAG40732.1|AF286719_1 XRN3 [Arabidopsis thaliana] gb|AEE35742.1| 5'-3' exoribonuclease 3 [Arabidopsis t
|
0.0
|
• FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3
|
0.0
|
• Blast2go: 5 -3 exoribonuclease 3-like
|
0.0
|
|
N-terminus
|