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Assembly Name: uagpf v2.0

Name: Exonuclease, RNase T/DNA polymerase III

Term: IPR013520  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene708 uagpf v2.0 712
• AutoFact: RNA exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RXA0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: exonuclease-like protein 0.0
C-terminus
uagpf_v2_unigene4016 uagpf v2.0 595
• AutoFact: Os10g0407500 protein n=4 Tax=Oryza sativa RepID=Q0IXT1_ORYSJ 6.0e-39
• FL-Next: tr=Os10g0407500 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: exonuclease family protein 1.4013e-45
Putative C-terminus
uagpf_v2_unigene4328 uagpf v2.0 743
• AutoFact: oligoribonuclease [Arabidopsis thaliana] dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana] gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana] 0.0
• FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: oligoribonuclease 0.0
C-terminus
uagpf_v2_unigene5887 uagpf v2.0 545
• AutoFact: 3'-5' exoribonuclease 1 [Gallus gallus] emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus] 2.0e-20
• Blast2go: uncharacterized exonuclease domain-containing protein at3g15140-like 0.0
unknown
uagpf_v2_unigene6859 uagpf v2.0 705
• AutoFact: exonuclease-like protein [Arabidopsis thaliana] gb|ACF16171.1| At3g27970 [Arabidopsis thaliana] dbj|BAH30474.1| hypothetical protein [Arabidopsis thaliana] gb|AEE77388.1| exonuclease-like protein [Arabidopsis thaliana] 0.0
• Blast2go: exonuclease-like protein 0.0
unknown
uagpf_v2_unigene11266 uagpf v2.0 562
• AutoFact: 3'-5' exoribonuclease 1 [Gallus gallus] emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus] 2.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized exonuclease domain-containing protein at3g15140-like 0.0
Internal
uagpf_v2_unigene12209 uagpf v2.0 723
• AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
• Blast2go: small rna degrading nuclease 3 0.0
Putative coding
uagpf_v2_unigene14756 uagpf v2.0 1381
• AutoFact: DNA polymerase III subunit epsilon n=3 Tax=Zea mays RepID=B6TZF8_MAIZE 0.0
• FL-Next: tr=DNA polymerase III subunit epsilon; Zea mays (Maize). 0.0
• Blast2go: dna polymerase iii polc-type-like 0.0
Complete
uagpf_v2_unigene19054 uagpf v2.0 2324
• AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 exoribonuclease 0.0
Complete
uagpf_v2_unigene26806 uagpf v2.0 582
• AutoFact: oligoribonuclease [Arabidopsis thaliana] sp|Q9ZVE0.2|ORN_ARATH RecName: Full=Oligoribonuclease gb|AAL36387.1| unknown protein [Arabidopsis thaliana] gb|AAN71962.1| unknown protein [Arabidopsis thaliana] gb|AEC07912.1| oligoribonuclease [Arabidopsis thalia 0.0
• Blast2go: oligoribonuclease 0.0
unknown
uagpf_v2_unigene27704 uagpf v2.0 433
• AutoFact: exonuclease family protein [Arabidopsis thaliana] dbj|BAB11450.1| exonuclease-like protein [Arabidopsis thaliana] gb|AED91196.1| exonuclease family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: exonuclease family protein 0.0
N-terminus
uagpf_v2_unigene32065 uagpf v2.0 700
• AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 exoribonuclease 0.0
Internal
uagpf_v2_unigene38389 uagpf v2.0 470
• AutoFact: oligoribonuclease [Arabidopsis thaliana] dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana] gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana] 0.0
• FL-Next: sp=Oligoribonuclease; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: oligoribonuclease 0.0
C-terminus
uagpf_v2_unigene41399 uagpf v2.0 500
• AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3 exoribonuclease 0.0
Internal
uagpf_v2_unigene41781 uagpf v2.0 199
• AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
• Blast2go: small rna degrading nuclease 3 0.0
unknown
uagpf_v2_unigene42169 uagpf v2.0 413
• AutoFact: exonuclease-like protein [Arabidopsis thaliana] 3.0e-22
• FL-Next: Isoform 2 of Small RNA degrading nuclease 5 OS=Arabidopsis thaliana GN=SDN5 0.0
• Blast2go: small rna degrading nuclease 5-like 1.16204e-26
N-terminus
uagpf_v2_unigene42440 uagpf v2.0 284
• AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
• FL-Next: sp=Small RNA degrading nuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: small rna degrading nuclease 3 0.0
Internal
uagpf_v2_unigene52777 uagpf v2.0 504
• AutoFact: RNA exonuclease, putative n=1 Tax=Ricinus communis RepID=B9RXA0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: exonuclease-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain