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Assembly Name: uagpf v2.0

Name: Exoribonuclease, phosphorolytic domain 1

Term: IPR001247  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene256 uagpf v2.0 363
AutoFact: Polynucleotide phosphorylase n=1 Tax=Pisum sativum RepID=O24288_PEA 0.0
FL-Next: tr=Polynucleotide phosphorylase; Pisum sativum (Garden pea). 0.0
Blast2go: polynucleotide phosphorylase 0.0
Internal
uagpf_v2_unigene273 uagpf v2.0 382
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
N-terminus
uagpf_v2_unigene2162 uagpf v2.0 1125
AutoFact: polyribonucleotide nucleotidyltransferase [Arabidopsis thaliana] emb|CAB43864.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB43865.1| polynucleotide phosphorylase [Arabidopsis thaliana] emb|CAB87625.1| polynucleotide phosphorylase [Arabidop 3.0e-40
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 4.2039e-45
N-terminus
uagpf_v2_unigene2185 uagpf v2.0 522
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp46 0.0
N-terminus
uagpf_v2_unigene2649 uagpf v2.0 380
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
Putative coding
uagpf_v2_unigene9275 uagpf v2.0 413
AutoFact: Mg protoporphyrin IX chelatase n=2 Tax=Nicotiana tabacum RepID=O22435_TOBAC 0.0
FL-Next: tr=Mg protoporphyrin IX chelatase; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
uagpf_v2_unigene10434 uagpf v2.0 724
AutoFact: Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease [Medicago truncatula] 0.0
Blast2go: exosome complex component rrp46 0.0
unknown
uagpf_v2_unigene11560 uagpf v2.0 782
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
C-terminus
uagpf_v2_unigene11750 uagpf v2.0 540
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
N-terminus
uagpf_v2_unigene12131 uagpf v2.0 678
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
Blast2go: exosome complex component mtr3-like 0.0
unknown
uagpf_v2_unigene12866 uagpf v2.0 813
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
C-terminus
uagpf_v2_unigene15099 uagpf v2.0 379
AutoFact: Exosome complex exonuclease rrp43, putative n=1 Tax=Ricinus communis RepID=B9T1F1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp43-like 0.0
C-terminus
uagpf_v2_unigene15172 uagpf v2.0 802
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein Sb08g006250; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
C-terminus
uagpf_v2_unigene24997 uagpf v2.0 570
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Internal
uagpf_v2_unigene25054 uagpf v2.0 448
AutoFact: exosome complex component RRP41 [Arabidopsis thaliana] ref|NP_001118878.1| exosome complex component RRP41 [Arabidopsis thaliana] gb|AAF04590.1|AF191741_1 exonuclease RRP41 [Arabidopsis thaliana] emb|CAB71092.1| exonuclease RRP41 [Arabidopsis thaliana] db 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component rrp41 0.0
N-terminus
uagpf_v2_unigene25313 uagpf v2.0 412
AutoFact: putative exoribonuclease [Oryza sativa Japonica Group] gb|ABF99850.1| 3' exoribonuclease family, domain 1 containing protein, expressed [Oryza sativa Japonica Group] gb|EAZ29273.1| hypothetical protein OsJ_13338 [Oryza sativa Japonica Group] dbj|BAH00946. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex component mtr3-like 0.0
Internal
uagpf_v2_unigene31433 uagpf v2.0 497
AutoFact: 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] ref|NP_850537.1| 3'-5'-exoribonuclease family protein [Arabidopsis thaliana] gb|AAG40370.1|AF325018_1 AT3g07750 [Arabidopsis thaliana] dbj|BAC43581.1| putative 3' exoribonuclease [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: exosome complex exonuclease rrp42 0.0
Putative N-terminus
uagpf_v2_unigene31859 uagpf v2.0 512
AutoFact: Exosome complex exonuclease rrp45, putative n=1 Tax=Ricinus communis RepID=B9SYQ9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: 3 -5 -exoribonuclease cer7 protein 0.0
N-terminus
uagpf_v2_unigene37839 uagpf v2.0 388
AutoFact: putative polyribonucleotide nucleotidyltransferase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: polyribonucleotide nucleotidyltransferase 0.0
Internal
uagpf_v2_unigene49466 uagpf v2.0 308
AutoFact: polyribonucleotide phophorylase [Spinacia oleracea] 1.0e-18
Blast2go: polyribonucleotide nucleotidyltransferase 7.68769e-23
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain