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Assembly Name: uagpf v2.0

Name: TRAM/LAG1/CLN8 homology domain

Term: IPR006634  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1008 uagpf v2.0 990
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
C-terminus
uagpf_v2_unigene2454 uagpf v2.0 487
AutoFact: LAG1 longevity assurance homolog 3 n=3 Tax=Arabidopsis RepID=LAG13_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Internal
uagpf_v2_unigene2896 uagpf v2.0 1387
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
Complete
uagpf_v2_unigene3624 uagpf v2.0 837
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene5067 uagpf v2.0 571
AutoFact: LAG1-like protein 1 n=1 Tax=Orobanche cernua var. cumana RepID=C6KE70_OROCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
N-terminus
uagpf_v2_unigene7993 uagpf v2.0 582
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8032 uagpf v2.0 541
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
N-terminus
uagpf_v2_unigene8588 uagpf v2.0 285
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene11024 uagpf v2.0 514
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene12662 uagpf v2.0 1354
AutoFact: RHO guanyl-nucleotide exchange factor 9 [Arabidopsis thaliana] emb|CAB41934.1| putative protein [Arabidopsis thaliana] emb|CAB78366.1| putative protein [Arabidopsis thaliana] gb|ABE66063.1| hypothetical protein At4g13240 [Arabidopsis thaliana] gb|AEE83250 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13108 uagpf v2.0 534
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.66319e-33
C-terminus
uagpf_v2_unigene13852 uagpf v2.0 582
AutoFact: LAG1 longevity assurance homolog 3 n=3 Tax=Arabidopsis RepID=LAG13_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
C-terminus
uagpf_v2_unigene14078 uagpf v2.0 599
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
N-terminus
uagpf_v2_unigene14808 uagpf v2.0 549
AutoFact: LAG1-like protein 1 n=1 Tax=Orobanche cernua var. cumana RepID=C6KE70_OROCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
C-terminus
uagpf_v2_unigene15981 uagpf v2.0 778
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
C-terminus
uagpf_v2_unigene16662 uagpf v2.0 1414
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene18368 uagpf v2.0 611
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 0.0
C-terminus
uagpf_v2_unigene19092 uagpf v2.0 1091
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 0.0
C-terminus
uagpf_v2_unigene25641 uagpf v2.0 438
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 0.0
N-terminus
uagpf_v2_unigene31302 uagpf v2.0 524
AutoFact: Rop guanine nucleotide exchange factor 1 [Arabidopsis thaliana] sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like emb|CAB37499.1| putative protein [Arab 0.0
Blast2go: protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain