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Assembly Name: uagpf v2.0

Name: Zinc finger, GRF-type

Term: IPR010666  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10016 uagpf v2.0 351
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc knuckle (cchc-type) family protein 0.0
C-terminus
uagpf_v2_unigene14045 uagpf v2.0 957
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 9.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 3.08286e-44
Complete
uagpf_v2_unigene15463 uagpf v2.0 510
AutoFact: GRF zinc finger family protein n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXT9_ORYSJ 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-like protein 5 0.0
Complete
uagpf_v2_unigene19054 uagpf v2.0 2324
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 exoribonuclease 0.0
Complete
uagpf_v2_unigene32065 uagpf v2.0 700
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 exoribonuclease 0.0
Internal
uagpf_v2_unigene41176 uagpf v2.0 312
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
Blast2go: zinc knuckle (cchc-type) family protein 0.0
unknown
uagpf_v2_unigene41399 uagpf v2.0 500
AutoFact: Histone mRNA exonuclease 1 n=3 Tax=Andropogoneae RepID=B6THB1_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 exoribonuclease 0.0
Internal
uagpf_v2_unigene43167 uagpf v2.0 307
AutoFact: DNA topoisomerase n=1 Tax=Sorghum bicolor RepID=C5WWW3_SORBI 3.0e-37
FL-Next: sp=DNA topoisomerase; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: dna topoisomerase iii 4.2039e-44
Internal
uagpf_v2_unigene47760 uagpf v2.0 319
AutoFact: CCHC-type zinc knuckle protein [Arabidopsis thaliana] emb|CAB86673.1| putative protein [Arabidopsis thaliana] gb|AAL38752.1| unknown protein [Arabidopsis thaliana] gb|AAM91719.1| unknown protein [Arabidopsis thaliana] gb|AEE77756.1| CCHC-type zinc knuckle 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc knuckle (cchc-type) family protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain