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Assembly Name: uagpf v2.0

Name: RNA polymerase I specific transcription initiation factor RRN3

Term: IPR007991  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene3837 uagpf v2.0 349
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Internal
uagpf_v2_unigene4360 uagpf v2.0 726
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Putative coding
uagpf_v2_unigene6965 uagpf v2.0 509
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
unknown
uagpf_v2_unigene7259 uagpf v2.0 647
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Putative C-terminus
uagpf_v2_unigene11793 uagpf v2.0 1034
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
N-terminus
uagpf_v2_unigene14059 uagpf v2.0 405
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13 [Arabidopsis thaliana] gb|AAK96653.1| elongation factor EF-2 [Arabidopsis thaliana] gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana] gb|AAN31864.1| p 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene25696 uagpf v2.0 334
• AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene30909 uagpf v2.0 285
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Putative coding
uagpf_v2_unigene38351 uagpf v2.0 335
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Internal
uagpf_v2_unigene49007 uagpf v2.0 354
• AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
• Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain