Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Translation elongation factor EF1B/ribosomal protein S6

Term: IPR014717  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1261 uagpf v2.0 327
AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6162 uagpf v2.0 734
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-beta 0.0
C-terminus
uagpf_v2_unigene6701 uagpf v2.0 535
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-beta 0.0
N-terminus
uagpf_v2_unigene7572 uagpf v2.0 623
AutoFact: Ribosomal protein S6 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s6 0.0
N-terminus
uagpf_v2_unigene13933 uagpf v2.0 601
AutoFact: Unassigned protein
Blast2go: small subunit ribosomal protein s6 0.0
unknown
uagpf_v2_unigene14051 uagpf v2.0 1394
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
Complete
uagpf_v2_unigene15532 uagpf v2.0 981
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small subunit ribosomal protein s6 0.0
Complete
uagpf_v2_unigene17736 uagpf v2.0 781
AutoFact: small subunit ribosomal protein S6 [Arabidopsis thaliana] dbj|BAB01802.1| unnamed protein product [Arabidopsis thaliana] gb|AAM67031.1| unknown [Arabidopsis thaliana] dbj|BAC42712.1| unknown protein [Arabidopsis thaliana] gb|AAO50729.1| unknown protein [A 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small subunit ribosomal protein s6 0.0
Complete
uagpf_v2_unigene18796 uagpf v2.0 770
AutoFact: Putative elongation factor n=1 Tax=Cryptomeria japonica RepID=Q1XG58_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1- 0.0
N-terminus
uagpf_v2_unigene50066 uagpf v2.0 405
AutoFact: Unassigned protein
unknown
uagpf_v2_unigene51519 uagpf v2.0 463
AutoFact: Unassigned protein
Blast2go: small subunit ribosomal protein s6 0.0
unknown
uagpf_v2_unigene53777 uagpf v2.0 516
AutoFact: Elongation factor 1-delta n=1 Tax=Pimpinella brachycarpa RepID=EF1D_PIMBR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-delta 1 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain